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13_1_40cm_2_scaffold_1256

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1256_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..867)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037AFBE4
CHAD domain-containing protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_40cm_2_scaffold_1256_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(913..3024)
DNA (2112bp) protein (704aa)
ppk; polyphosphate kinase (EC:2.7.4.1) Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ppk; polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2I0_MODMB
13_1_40cm_2_scaffold_1256_3
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3201..3359)
DNA (159bp) protein (53aa)
Putative uncharacterized protein id=2310167 bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_IG2069_Anaerolineales_43_63
13_1_40cm_2_scaffold_1256_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3494..4423
DNA (930bp) protein (310aa)
LysR family transcriptional regulator YeiE n=1 Tax=Rhodovulum sp. PH10 RepID=J6LE97_9RHOB
LysR family transcriptional regulator YeiE {ECO:0000313|EMBL:EJW11473.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source=
LysR family transcriptional regulator
13_1_40cm_2_scaffold_1256_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4499..5806)
DNA (1308bp) protein (436aa)
Glycoside hydrolase family 4 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1L5_9CHLR rbh
Glycoside hydrolase family 4 {ECO:0000313|EMBL:EFH82659.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
family 4 glycosyl hydrolase
13_1_40cm_2_scaffold_1256_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5990..6787
DNA (798bp) protein (266aa)
Transcriptional regulator, ArsR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AVY2_HERA2
ArsR family transcriptional regulator Tax=RBG_16_RIF_CHLX_72_14_curated
ArsR family transcriptional regulator
13_1_40cm_2_scaffold_1256_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6875..7966
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVQ8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84291.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_1_40cm_2_scaffold_1256_trna_1
unknown

Not on your lists

comp(8097..8170)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_1256_8
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8228..8629)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QPY4_RALPI
Glyoxalase {ECO:0000313|EMBL:EYS85400.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
13_1_40cm_2_scaffold_1256_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8731..13107)
DNA (4377bp) protein (1459aa)
putative ATP-dependent helicase (EC:3.6.1.-) Tax=RBG_16_RIF_CHLX_70_13_curated
putative ATP-dependent helicase (EC:3.6.1.-) id=14628638 bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
lhr; DEAD/DEAH box helicase domain-containing protein
13_1_40cm_2_scaffold_1256_10
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13267..13767
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0M0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50816.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU1
hypothetical protein
13_1_40cm_2_scaffold_1256_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13759..14514)
DNA (756bp) protein (252aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJI8_THEM7
ccdA; cytochrome c biogenesis protein CcdA Tax=RBG_16_Chloroflexi_63_12_curated
cytochrome C biogenesis protein transmembrane region
13_1_40cm_2_scaffold_1256_12
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14508..15347)
DNA (840bp) protein (280aa)
Lipase/esterase n=1 Tax=Streptomyces sp. AA4 RepID=D9VB17_9ACTO
Lipase/esterase {ECO:0000313|EMBL:EFL09866.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
alpha/beta hydrolase
13_1_40cm_2_scaffold_1256_13
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

15362..17236
DNA (1875bp) protein (625aa)
pepF; oligopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RBG_16_KB1_OP1_55_9_curated
Oligopeptidase F n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9W7_CALAS rbh
pepF; oligopeptidase F
13_1_40cm_2_scaffold_1256_14
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17219..17689)
DNA (471bp) protein (157aa)
putative acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2H4_ANATU
GNAT family acetyltransferase {ECO:0000313|EMBL:KIE51875.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
13_1_40cm_2_scaffold_1256_15
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17704..18291
DNA (588bp) protein (196aa)
Alpha-mannosidase {ECO:0000313|EMBL:EFG05326.1}; EC=3.2.1.24 {ECO:0000313|EMBL:EFG05326.1};; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00035D451E
alpha-mannosidase
13_1_40cm_2_scaffold_1256_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18291..20405
DNA (2115bp) protein (705aa)
alpha-mannosidase n=1 Tax=Streptomyces acidiscabies RepID=UPI00028A1B40
ama1; alpha-mannosidase
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_40cm_2_scaffold_1256_17
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20365..21603)
DNA (1239bp) protein (413aa)
MFS transporter n=1 Tax=Salinispora pacifica RepID=UPI000382CE53 rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABV96294.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (
13_1_40cm_2_scaffold_1256_18
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21600..21899)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037CCA32
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:ABS01696.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (st
13_1_40cm_2_scaffold_1256_19
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21896..22417)
DNA (522bp) protein (174aa)
AzlC family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8R1_NAKMY
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:ACV79116.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099
13_1_40cm_2_scaffold_1256_20
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22548..22994)
DNA (447bp) protein (149aa)
Lipoprotein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XR07_9ACTO
Lipoprotein {ECO:0000313|EMBL:EFL40520.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
hypothetical protein
13_1_40cm_2_scaffold_1256_21
unknown

Not on your lists

comp(23031..23129)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 22 items

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