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13_1_40cm_2_scaffold_1440

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1440_1
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(108..623)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RMM0_FRAAA
hypothetical protein Tax=RBG_16_Acidobacteria_64_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1440_2
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(710..1210)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3Z1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56181.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
13_1_40cm_2_scaffold_1440_3
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

1314..1817
DNA (504bp) protein (168aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ACF12011.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ACF12011.1};; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlor
Hypoxanthine phosphoribosyltransferase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QQ08_CHLP8
13_1_40cm_2_scaffold_1440_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(1865..3136)
DNA (1272bp) protein (424aa)
cytosine deaminase (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1] id=14631917 bin=bin9_gal15 species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
cytosine deaminase (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1] Tax=CSP1_3_Armatimonadetes
cytosine deaminase
13_1_40cm_2_scaffold_1440_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3210..4688
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037EB998 rbh
Cytosine permease {ECO:0000313|EMBL:ETK35803.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
cytosine/purines, uracil, thiamine, allantoin permease
13_1_40cm_2_scaffold_1440_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4928..5341
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C922_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40315.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_2_scaffold_1440_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5338..6546
DNA (1209bp) protein (403aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EEF59481.1}; EC=3.5.1.87 {ECO:0000313|EMBL:EEF59481.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobial
Amidase, hydantoinase/carbamoylase family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKY7_9BACT
hydantase: amidase, hydantoinase/carbamoylase family
13_1_40cm_2_scaffold_1440_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6543..7823
DNA (1281bp) protein (427aa)
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; TaxID=42256 species="Bacteria; Actinobacter
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00035C73DA
allantoinase: allantoinase
13_1_40cm_2_scaffold_1440_9
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(7798..9126)
DNA (1329bp) protein (443aa)
Amidohydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS78_RUBXD
Cytosine deaminase and related metal-dependent hydrolase
Cytosine deaminase and related metal-dependent hydrolase {ECO:0000313|EMBL:AHY46583.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteracea
13_1_40cm_2_scaffold_1440_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9123..9911)
DNA (789bp) protein (263aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG05751.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG05751.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria;
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS77_RUBXD
13_1_40cm_2_scaffold_1440_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9911..11407)
DNA (1497bp) protein (499aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG05751.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG05751.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria;
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS77_RUBXD
13_1_40cm_2_scaffold_1440_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11404..11631)
DNA (228bp) protein (76aa)
Carbon-monoxide dehydrogenase small subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K152_SACES
coxS3; Carbon-monoxide dehydrogenase small subunit
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:CCH30308.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothri
13_1_40cm_2_scaffold_1440_13
unknown

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12016..12327
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_2_scaffold_1440_14
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12677..13528)
DNA (852bp) protein (284aa)
uox; Uricase (EC:1.7.3.3)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; TaxID
Uricase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SYW2_AMYOR
13_1_40cm_2_scaffold_1440_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..13854)
DNA (330bp) protein (110aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMJ1_MYXFH
transthyretin family protein
13_1_40cm_2_scaffold_1440_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13851..14345)
DNA (495bp) protein (165aa)
OHCU decarboxylase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B31DFF
OHCU decarboxylase
OHCU decarboxylase {ECO:0000313|EMBL:AHG89680.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1440_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14338..16008)
DNA (1671bp) protein (557aa)
ade; adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B55181 rbh
ade; adenine deaminase
13_1_40cm_2_scaffold_1440_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16042..18270
DNA (2229bp) protein (743aa)
carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) (EC:1.2.99.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) id=3847107 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Carbon monoxide dehydrogenase large chain
13_1_40cm_2_scaffold_1440_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18267..19688
DNA (1422bp) protein (474aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KJL37220.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KJL37220.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacte
Putative acyl-CoA synthetase YngI (EC:6.2.1.-)
AMP-binding protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036DA449
13_1_40cm_2_scaffold_1440_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19672..20463
DNA (792bp) protein (264aa)
Beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:CDM23595.1}; EC=3.1.1.24 {ECO:0000313|EMBL:CDM23595.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
alpha/beta hydrolase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B2EF
13_1_40cm_2_scaffold_1440_21
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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20456..21217
DNA (762bp) protein (254aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8T6_THEBD
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADG89898.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC
13_1_40cm_2_scaffold_1440_22
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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21214..22143
DNA (930bp) protein (310aa)
Putative oxidoreductase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GNR2_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB05237.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
5,10-methylene tetrahydromethanopterin reductase
13_1_40cm_2_scaffold_1440_23
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22128..22652)
DNA (525bp) protein (175aa)
short-chain dehydrogenase/reductase SDR Tax=CG_Delta_05
Short-chain dehydrogenase/reductase SDR id=4748891 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase
Displaying 23 items

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