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13_1_40cm_2_scaffold_10177

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10177_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..391
DNA (390bp) protein (130aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000369A1BA
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_2_scaffold_10177_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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420..824
DNA (405bp) protein (135aa)
UPI0003A04C7D related cluster n=1 Tax=unknown RepID=UPI0003A04C7D
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG88563.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_10177_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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884..1276
DNA (393bp) protein (131aa)
UPI0003A04C7D related cluster n=1 Tax=unknown RepID=UPI0003A04C7D
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG88563.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_10177_4
unknown

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1506..1769
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_10177_5
unknown

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1799..1993
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_2_scaffold_10177_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(2029..3468)
DNA (1440bp) protein (480aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=981222 species="Bacteria; Acidob
Proline--tRNA ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHX6_CHLTF
13_1_40cm_2_scaffold_10177_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3458..4501)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W2_SPHTD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_40cm_2_scaffold_10177_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4501..5625)
DNA (1125bp) protein (375aa)
LVIVD repeat-containing protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGX2_MESCW
LVIVD repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
LVIVD repeat-containing protein
13_1_40cm_2_scaffold_10177_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5696..6334)
DNA (639bp) protein (213aa)
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Luciferase-like, subgroup id=4676999 bin=GWF2_Methylomirabilis_70_14 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
F420-dependent oxidoreductase
13_1_40cm_2_scaffold_10177_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6650..7702
DNA (1053bp) protein (351aa)
(S)-2-hydroxy-acid oxidase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FMN-dependent alpha-hydroxy acid dehydrogenase id=4766454 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lldA; L-lactate dehydrogenase
13_1_40cm_2_scaffold_10177_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7742..9304
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=E0X6P7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX06590.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_2_scaffold_10177_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(9319..9624)
DNA (306bp) protein (102aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) id=4771371 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_10177_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9822..10580
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40949.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_10177_14
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(10595..11671)
DNA (1077bp) protein (359aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] id=16783910 bin=RBG_16_Aminicenantes_63_16_plus species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7)
13_1_40cm_2_scaffold_10177_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(11747..11968)
DNA (222bp) protein (74aa)
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 id=14626055 bin=bin7_NC10_sister species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=CSP1_6_Rokubacteria
30S ribosomal protein S21
13_1_40cm_2_scaffold_10177_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12134..12448)
DNA (315bp) protein (105aa)
Glycine-rich RNA binding protein id=3327195 bin=GWF2_Methylomirabilis_70_14 species=Coprinopsis cinerea genus=Coprinopsis taxon_order=Agaricales taxon_class=Agaricomycetes phylum=Basidiomycota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine-rich RNA binding protein Tax=GWA2_Rokubacteria_70_23_curated
RNP-1 like RNA-binding protein
Displaying 16 items

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