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13_1_40cm_2_scaffold_2753

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2753_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..309)
DNA (309bp) protein (103aa)
2-oxoacid ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-oxoacid ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase id=3986305 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2753_2
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

392..817
DNA (426bp) protein (142aa)
Acetyltransferase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q9J1_STRC2
Acetyltransferase {ECO:0000313|EMBL:EFG05611.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 270
acetyltransferase
13_1_40cm_2_scaffold_2753_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(814..1206)
DNA (393bp) protein (131aa)
nuclease; K01174 micrococcal nuclease [EC:3.1.31.1] Tax=GWA2_Rokubacteria_73_35_curated
Thermonuclease id=3986306 bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
micrococcal nuclease-like protein
13_1_40cm_2_scaffold_2753_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1452..1700)
DNA (249bp) protein (83aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3986308 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2753_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1733..2245)
DNA (513bp) protein (171aa)
Putative uncharacterized protein id=3986310 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K06962 Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_2753_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2508..4175
DNA (1668bp) protein (556aa)
gamma-glutamyltransferase 2 (EC:2.3.2.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Gamma-glutamyltransferase id=2558577 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
gamma-glutamyltranspeptidase
13_1_40cm_2_scaffold_2753_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4320..5528)
DNA (1209bp) protein (403aa)
Uncharacterized protein id=2558561 bin=GWA2_Methylomirabilis_73_35 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_2753_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6118..8109
DNA (1992bp) protein (664aa)
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2)
Putative Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA72_9BACT
13_1_40cm_2_scaffold_2753_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

8117..8647
DNA (531bp) protein (177aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627061 bin=bin7_NC10_sister species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_2753_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8706..9095)
DNA (390bp) protein (130aa)
Putative fluoride ion transporter CrcB n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGD5_ANADF
camphor resistance protein CrcB; K06199 CrcB protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
camphor resistance protein CrcB
13_1_40cm_2_scaffold_2753_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9138..9809)
DNA (672bp) protein (224aa)
hypothetical protein
Putative uncharacterized protein id=3870875 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_2753_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9869..11824
DNA (1956bp) protein (652aa)
peptidase S1 and S6, chymotrypsin/Hap Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase S1 and S6, chymotrypsin/Hap id=3870880 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S1 and S6, chymotrypsin/Hap
13_1_40cm_2_scaffold_2753_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11817..13040)
DNA (1224bp) protein (408aa)
Predicted acyl-CoA transferase/carnitine dehydratase id=3870908 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
L-carnitine dehydratase/bile acid-inducible protein F Tax=GWA2_Rokubacteria_73_35_curated
L-carnitine dehydratase/bile acid-inducible protein F
13_1_40cm_2_scaffold_2753_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13113..14087
DNA (975bp) protein (325aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ37_PSEUX
alcohol dehydrogenase, zinccontaining, putative Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_2_scaffold_2753_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14084..14515
DNA (432bp) protein (144aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=3870909 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2753_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14746..16884)
DNA (2139bp) protein (713aa)
guanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative transmembrane sensor domain protein id=2227968 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane sensor domain protein
13_1_40cm_2_scaffold_2753_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16984..17292
DNA (309bp) protein (103aa)
id=3523877 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_2753_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17297..17410)
DNA (114bp) protein (38aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_40cm_2_scaffold_2753_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17613..18938
DNA (1326bp) protein (442aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Putative uncharacterized protein id=2259308 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_2753_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18935..19774)
DNA (840bp) protein (280aa)
ABC-type tungstate transport system permease component-like protein id=2315320 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type tungstate transport system permease component-like protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type tungstate transport system permease component-like protein
13_1_40cm_2_scaffold_2753_21
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(19774..20205)
DNA (432bp) protein (144aa)
Putative transcriptional regulator, ModE family n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QPY5_VULDI
putative ModE family transcriptional regulator
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:ADN51545.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vu
Displaying 21 items

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