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13_1_40cm_2_scaffold_4470

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4470_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..1014
DNA (1014bp) protein (338aa)
2-dehydropantoate 2-reductase id=4221488 bin=GWA2_Methylomirabilis_73_35 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative 2-dehydropantoate 2-reductase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_4470_2

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1054..2601
DNA (1548bp) protein (516aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_2_scaffold_4470_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2598..2990
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
putative hydrolase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
amidohydrolase 2
13_1_40cm_2_scaffold_4470_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3065..3682)
DNA (618bp) protein (206aa)
Putative uncharacterized protein id=4695034 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_APKG5H11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NIPSNAP family protein
13_1_40cm_2_scaffold_4470_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3886..4947
DNA (1062bp) protein (354aa)
Putative neuraminidase n=1 Tax=uncultured bacterium 888 RepID=B8R8R8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX09237.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
BNR/Asp-box repeat family protein
13_1_40cm_2_scaffold_4470_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4951..5691)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HEG0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETX04304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
MerR family transcriptional regulator
13_1_40cm_2_scaffold_4470_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5710..6102)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5P4_ALIDK
hypothetical protein; K07068 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_40cm_2_scaffold_4470_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6107..6577)
DNA (471bp) protein (157aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Acetyl-CoA acyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAQ6_PHEZH
acetyl-CoA acetyltransferase
13_1_40cm_2_scaffold_4470_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6574..7263)
DNA (690bp) protein (230aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Acetyl-CoA acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5P5_ALIDK
acetyl-CoA acetyltransferase
13_1_40cm_2_scaffold_4470_10
bacterium YEK0313, Bacteria

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comp(7350..8294)
DNA (945bp) protein (315aa)
gluconolactonase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000375A167
Gluconolactonase {ECO:0000313|EMBL:CEJ13397.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative gluconolactonase
13_1_40cm_2_scaffold_4470_11
unknown

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8357..8467
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_2_scaffold_4470_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8516..9310
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U5_9BRAD
enoyl-CoA hydratase/isomerase family protein Tax=RBG_16_Gamma2_60_9_curated
enoyl-CoA hydratase
13_1_40cm_2_scaffold_4470_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9333..10712
DNA (1380bp) protein (460aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95673.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Cytosine deaminase-like metal-dependent hydrolase id=4757808 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM79 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
13_1_40cm_2_scaffold_4470_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10784..11362
DNA (579bp) protein (193aa)
Putative uncharacterized protein id=1709627 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_4470_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..13529)
DNA (2190bp) protein (730aa)
ABC transporter CydDC cysteine exporter family permease/ATP-binding protein CydC 1 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPZ1_9PROT
ABC transporter CydDC cysteine exporter family permease/ATP-binding protein CydC 1 {ECO:0000313|EMBL:EKE77318.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
ABC transporter ATP-binding membrane protein
13_1_40cm_2_scaffold_4470_16
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14233..14865
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FGZ2_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ36121.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia comple
13_1_40cm_2_scaffold_4470_17
unknown

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comp(14867..15079)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_2_scaffold_4470_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..16050
DNA (825bp) protein (275aa)
LysR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2J224_9PROT
LysR family transcriptional regulator {ECO:0000313|EMBL:EKE68887.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source=
LysR family transcriptional regulator
Displaying 18 items

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