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13_1_40cm_2_scaffold_761

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_761_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1386)
DNA (1386bp) protein (462aa)
AMP-dependent synthetase and ligase; K12507 acyl-CoA synthetase [EC:6.2.1.-] Tax=GWA2_Rokubacteria_70_23_curated
AMP-dependent synthetase and ligase id=4735164 bin=GWC2_Methylomirabilis_70_16 species=Burkholderia phytofirmans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AMP-dependent synthetase and ligase
13_1_40cm_2_scaffold_761_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1413..2120)
DNA (708bp) protein (236aa)
Branched chain amino acid ABC transporter ATP-binding protein id=4735156 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
braG; high-affinity branched-chain amino acid transporter ATP-binding protein BraG
13_1_40cm_2_scaffold_761_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2113..2880)
DNA (768bp) protein (256aa)
ABC transporter related id=4669397 bin=GWF2_Methylomirabilis_70_14 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter related protein
13_1_40cm_2_scaffold_761_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2870..3871)
DNA (1002bp) protein (334aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=4735152 bin=GWC2_Methylomirabilis_70_16 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched chain amino acid ABC transporter inner membrane protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease
13_1_40cm_2_scaffold_761_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3861..4721)
DNA (861bp) protein (287aa)
ABC transporter permease id=4735150 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_1_40cm_2_scaffold_761_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4741..5937)
DNA (1197bp) protein (399aa)
Putative exported protein id=4735148 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_2_scaffold_761_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

6268..6480
DNA (213bp) protein (71aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=RBG_16_NC10_65_8_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646430 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_761_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6544..6819
DNA (276bp) protein (92aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646434 bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_761_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6837..7247
DNA (411bp) protein (137aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_761_10
unknown

Not on your lists

comp(7267..7572)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_2_scaffold_761_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8584..9132
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Extracellular solute-binding protein family 5 id=4793584 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative oligopeptide ABC transporter (substrate-binding protein)
13_1_40cm_2_scaffold_761_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

9221..10849
DNA (1629bp) protein (543aa)
General secretion pathway protein A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT1_9BACT rbh
exeA; General secretion pathway protein A
General secretion pathway protein A {ECO:0000313|EMBL:CBE67730.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;
13_1_40cm_2_scaffold_761_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

10852..11529
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67731.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_761_14
unknown

Not on your lists

11684..12298
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_2_scaffold_761_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12409..13398
DNA (990bp) protein (330aa)
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldo/keto reductase id=4911286 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldo/keto reductase
13_1_40cm_2_scaffold_761_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(13436..13855)
DNA (420bp) protein (140aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_2_scaffold_761_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14181..14321
DNA (141bp) protein (47aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4327970 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_761_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14382..14657
DNA (276bp) protein (92aa)
peroxiredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiol-specific antioxidant protein id=4327972 bin=GWA2_Methylomirabilis_73_35 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
redoxin
13_1_40cm_2_scaffold_761_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14667..15605
DNA (939bp) protein (313aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ATPase associated with various cellular activities AAA_3 id=4327974 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ATPase associated with various cellular activities AAA_3
13_1_40cm_2_scaffold_761_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15622..16947
DNA (1326bp) protein (442aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4327976 bin=GWA2_Methylomirabilis_73_35 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_40cm_2_scaffold_761_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16944..18920
DNA (1977bp) protein (659aa)
transglutaminase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transglutaminase-like enzyme, predicted cysteine protease id=4327978 bin=GWA2_Methylomirabilis_73_35 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
transglutaminase-like enzyme, predicted cysteine protease
13_1_40cm_2_scaffold_761_22
unknown

Not on your lists

18917..19045
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_2_scaffold_761_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19058..19816
DNA (759bp) protein (253aa)
NAD-dependent epimerase/dehydratase id=4911885 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia graminis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase Tax=GWA2_Rokubacteria_73_35_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_761_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19813..20679
DNA (867bp) protein (289aa)
alpha/beta hydrolase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alpha/beta hydrolase family protein id=14627252 bin=bin7_NC10_sister species=Nocardiopsis alba genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
alpha/beta hydrolase family protein
13_1_40cm_2_scaffold_761_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20685..21101
DNA (417bp) protein (139aa)
Putative F420-dependent enzyme id=4327982 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like protein Tax=GWA2_Rokubacteria_73_35_curated
PPOX class F420-dependent protein
13_1_40cm_2_scaffold_761_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21110..22279)
DNA (1170bp) protein (390aa)
diguanylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
Diguanylate cyclase id=3850608 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Conserved protein of unknown function (membrane protein with a C-terminal Diguanylate cyclase domain)
13_1_40cm_2_scaffold_761_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(22325..22468)
DNA (144bp) protein (48aa)
NAD-dependent DNA ligase LigA Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_761_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22699..23541
DNA (843bp) protein (281aa)
hypothetical protein id=3850604 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_761_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23942..24439
DNA (498bp) protein (166aa)
id=3674960 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative O-methyltransferase id=2479228 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_761_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24439..25908
DNA (1470bp) protein (490aa)
Putative uncharacterized protein id=1906301 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
Displaying items 1-30 of 35 in total

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