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13_1_40cm_2_scaffold_763

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_763_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(213..530)
DNA (318bp) protein (106aa)
helix-hairpin-helix repeat-containing competence protein ComEA; K02237 competence protein ComEA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Competence protein ComEA helix-hairpin-helix repeat protein id=2197704 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence protein
13_1_40cm_2_scaffold_763_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(651..956)
DNA (306bp) protein (102aa)
HNH endonuclease family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HNH endonuclease family protein id=2197705 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HNH endonuclease family protein
13_1_40cm_2_scaffold_763_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(949..2877)
DNA (1929bp) protein (643aa)
ABC transporter ATP-binding protein with duplicated ATPase domains (EC:3.6.3.-)
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=2197706 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_763_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2909..3310)
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein id=2197707 bin=GWA2_Methylomirabilis_73_35 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=GWA2_Rokubacteria_73_35_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
13_1_40cm_2_scaffold_763_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3466..3651)
DNA (186bp) protein (62aa)
Alkylhydroperoxidase like protein, AhpD family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alkylhydroperoxidase like protein, AhpD family id=2197708 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_763_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3667..4173)
DNA (507bp) protein (169aa)
hypothetical protein id=2197709 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_763_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4177..5592)
DNA (1416bp) protein (472aa)
drug resistance transporter, EmrB/QacA subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
EmrB/QacA family drug resistance transporter id=2197710 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_2_scaffold_763_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5654..5980)
DNA (327bp) protein (109aa)
Putative uncharacterized protein id=2197711 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_763_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5977..6897)
DNA (921bp) protein (307aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II id=2197712 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_763_10
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7025..7801
DNA (777bp) protein (259aa)
Metal-dependent hydrolase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G5U9_9BURK
Metal-dependent hydrolase Tax=RBG_16_Gallionellales_56_9_curated
13_1_40cm_2_scaffold_763_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7832..9661)
DNA (1830bp) protein (610aa)
amino acid permease-associated protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid permease-associated region id=2197762 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid permease-associated protein
13_1_40cm_2_scaffold_763_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9686..11053)
DNA (1368bp) protein (456aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=GWC2_Rokubacteria_70_16_curated
Primary replicative DNA helicase id=4193627 bin=GWC2_Methylomirabilis_70_16 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
replicative DNA helicase
13_1_40cm_2_scaffold_763_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(11068..11511)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 id=2197764 bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L9 Tax=GWA2_Rokubacteria_73_35_curated
50S ribosomal protein L9
13_1_40cm_2_scaffold_763_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11805..12218)
DNA (414bp) protein (138aa)
Single-stranded DNA-binding protein id=2197765 bin=GWA2_Methylomirabilis_73_35 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ssb; Single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ssb; Single-stranded DNA-binding protein
13_1_40cm_2_scaffold_763_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(12218..12535)
DNA (318bp) protein (106aa)
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWA2_Rokubacteria_73_35_curated
30S ribosomal protein S6 id=2197766 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsF; 30S ribosomal protein S6
13_1_40cm_2_scaffold_763_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12751..13629)
DNA (879bp) protein (293aa)
60 kDa chaperonin id=2197767 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) Tax=GWA2_Rokubacteria_73_35_curated
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
Displaying 16 items

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