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13_1_40cm_2_scaffold_17772

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_17772_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..341)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036D7A51
secreted hydrolase
Putative secreted hydrolase {ECO:0000313|EMBL:CCH87762.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (str
13_1_40cm_2_scaffold_17772_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(320..799)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMD0_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36387.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
13_1_40cm_2_scaffold_17772_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(778..1212)
DNA (435bp) protein (145aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; Short=IPMI {ECO:00
3-isopropylmalate dehydratase small subunit n=1 Tax=Frankia sp. (strain EAN1pec) RepID=LEUD_FRASN
13_1_40cm_2_scaffold_17772_4
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1509..1775
DNA (267bp) protein (89aa)
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
13_1_40cm_2_scaffold_17772_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2031..2453
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UG51_9BACT
Uncharacterized protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_40cm_2_scaffold_17772_6
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2417..3706
DNA (1290bp) protein (430aa)
HygromycinB phosphotransferase n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GJY5_9BACL
HygromycinB phosphotransferase {ECO:0000313|EMBL:GAE09009.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;
13_1_40cm_2_scaffold_17772_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3739..4131)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG43_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27689.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_17772_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4263..5138
DNA (876bp) protein (292aa)
Putative uncharacterized protein id=4924573 bin=GWC2_Chloroflexi_73_18 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
permease of the drug/metabolite transporter (DMT) superfamily protein
13_1_40cm_2_scaffold_17772_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5131..6375)
DNA (1245bp) protein (415aa)
L-threonine ammonia-lyase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL15_THEM7
13_1_40cm_2_scaffold_17772_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6372..7751)
DNA (1380bp) protein (460aa)
GntR family transcriptional regulator (EC:2.6.1.39) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
aspartate aminotransferase n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0003130DA2 rbh
class I and II aminotransferase
13_1_40cm_2_scaffold_17772_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7829..8500)
DNA (672bp) protein (224aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] id=24406851 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
threonine synthase
13_1_40cm_2_scaffold_17772_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8538..9002)
DNA (465bp) protein (155aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Threonine synthase id=4809913 bin=GWA2_OP3_52_12 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
threonine synthase
13_1_40cm_2_scaffold_17772_13
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9240..9974)
DNA (735bp) protein (245aa)
Phage shock protein A, PspA n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B393_FRADG
phage shock protein PspA
Phage shock protein A, PspA {ECO:0000313|EMBL:AEH10893.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
13_1_40cm_2_scaffold_17772_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9971..10723)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035EB83A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK38652.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
13_1_40cm_2_scaffold_17772_15
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10723..11976)
DNA (1254bp) protein (418aa)
von Willebrand factor type A n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6H0_THEBD
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ADG87542.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 1
Displaying 15 items

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