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13_1_40cm_2_scaffold_857

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_857_1
unknown

Not on your lists

1..126
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_857_2
Human herpesvirus 4, Lymphocryptovirus, Herpesvirales, Viruses

Not on your lists

comp(166..525)
DNA (360bp) protein (120aa)
EBNA-1 {ECO:0000313|EMBL:AFY97913.1}; TaxID=10376 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.;" source="Epstein-Barr virus (stra
13_1_40cm_2_scaffold_857_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

676..966
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_2_scaffold_857_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1093..1839
DNA (747bp) protein (249aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=GWC2_RIF_CHLX_73_18_curated
glucokinase (EC:2.7.1.2)
ROK family protein id=4531705 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_2_scaffold_857_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1865..2920
DNA (1056bp) protein (352aa)
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC:1.2.1.12) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=uncultured bacterium 148 RepID=E3T6P0_9BACT rbh
13_1_40cm_2_scaffold_857_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2928..4118
DNA (1191bp) protein (397aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYZ3_9BACT
13_1_40cm_2_scaffold_857_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4115..5410
DNA (1296bp) protein (432aa)
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=14630110 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
eno; phosphopyruvate hydratase (EC:4.2.1.11)
13_1_40cm_2_scaffold_857_8
unknown

Not on your lists

comp(5371..5514)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_2_scaffold_857_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5715..7004
DNA (1290bp) protein (430aa)
AAA ATPase central domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNZ9_ROSCS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase central domain-containing protein
13_1_40cm_2_scaffold_857_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7134..9647
DNA (2514bp) protein (838aa)
Pyruvate phosphate dikinase PEP/pyruvate-binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFZ2_NAKMY rbh
pyruvate phosphate dikinase PEP/pyruvate-binding protein
Pyruvate phosphate dikinase PEP/pyruvate-binding {ECO:0000313|EMBL:ACV78103.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella mult
13_1_40cm_2_scaffold_857_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(9658..9939)
DNA (282bp) protein (94aa)
30S ribosomal protein S20 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RS20_ANADF
rpsT; 30S ribosomal protein S20 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsT; 30S ribosomal protein S20
13_1_40cm_2_scaffold_857_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10240..11538
DNA (1299bp) protein (433aa)
hypothetical protein; K03980 virulence factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
integral membrane protein MviN; K03980 virulence factor id=14629931 bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_2_scaffold_857_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

11717..12187
DNA (471bp) protein (157aa)
id=4708295 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
id=4708295 Tax=GWC2_Nitrospirae_57_13_curated
13_1_40cm_2_scaffold_857_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12288..14096
DNA (1809bp) protein (603aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein LepA
GTP-binding protein LepA; K03596 GTP-binding protein LepA id=14628144 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi rbh
13_1_40cm_2_scaffold_857_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14099..14590
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_2_scaffold_857_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14587..15795
DNA (1209bp) protein (403aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G5_SPHTD
13_1_40cm_2_scaffold_857_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15798..16181
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7V8_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB52852.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
13_1_40cm_2_scaffold_857_18
unknown

Not on your lists

comp(16178..16435)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_857_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16984..17091)
DNA (108bp) protein (36aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_2_scaffold_857_20
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17088..18008)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VIX3_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX77898.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
XRE family transcriptional regulator
13_1_40cm_2_scaffold_857_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18085..18783
DNA (699bp) protein (233aa)
Putative Crp family transcriptional regulator n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WTV0_9MICO
Crp/Fnr family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_2_scaffold_857_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18784..19176
DNA (393bp) protein (131aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0A7_COMTE
transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
chemotaxis protein CheY
13_1_40cm_2_scaffold_857_23
Listeria booriae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19177..19593)
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel n=2 Tax=Geobacter sulfurreducens RepID=MSCL_GEOSL
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1552123 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria booriae.;"
mscL; large-conductance mechanosensitive channel
13_1_40cm_2_scaffold_857_24
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19763..20815
DNA (1053bp) protein (351aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=HRCA_ROSCS
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;"
13_1_40cm_2_scaffold_857_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20815..21417
DNA (603bp) protein (201aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Protein GrpE id=4531816 bin=GWC2_Chloroflexi_73_18 species=uncultured bacterium 148 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GrpE protein HSP-70 cofactor
13_1_40cm_2_scaffold_857_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21460..21603)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEG2_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_857_27
unknown

Not on your lists

comp(21679..21831)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_2_scaffold_857_28
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(22696..23205)
DNA (510bp) protein (170aa)
Os05g0302916; Hypothetical protein. Tax=RBG_16_RIF_CHLX_69_14_curated
hypothetical protein
Os05g0302916; Hypothetical protein. id=12552395 bin=BDI species=Alistipes sp. CAG:29 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BDI organism_group=Betaproteobacteria
13_1_40cm_2_scaffold_857_29
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(23569..24408)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DCA2_9BACL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
membrane protease subunit, stomatin/prohibitin
Displaying 29 items

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