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13_1_40cm_2_scaffold_2057

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2057_trna_2
unknown

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comp(1..83)
DNA (83bp)
transferRNA
13_1_40cm_2_scaffold_2057_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(111..671)
DNA (561bp) protein (187aa)
alkyl hydroperoxide reductase id=14427440 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
alkyl hydroperoxide reductase Tax=CSP1_1_Thaumarchaeota
alkyl hydroperoxide reductase
13_1_40cm_2_scaffold_2057_trna_1
unknown

Not on your lists

758..829
DNA (72bp)
transferRNA
13_1_40cm_2_scaffold_2057_2
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1265..1624)
DNA (360bp) protein (120aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B369_9ARCH
Response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AJW71290.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumi
13_1_40cm_2_scaffold_2057_3

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comp(1621..3339)
DNA (1719bp) protein (573aa)
Sensory-regulatory protein RpfC {ECO:0000313|EMBL:KFM18817.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFM18817.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;
hypothetical protein n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI0003785856
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_2057_4
unknown

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comp(3687..4022)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_2_scaffold_2057_5
unknown

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comp(4185..4367)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_2_scaffold_2057_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4736..5020
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05887.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_2_scaffold_2057_7
unknown

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5279..5440
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_2_scaffold_2057_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(5449..5808)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AST0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05771.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_2057_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

6118..7149
DNA (1032bp) protein (344aa)
hypothetical protein id=14427438 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_2057_10
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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7179..7655
DNA (477bp) protein (159aa)
Cytidyltransferase-like protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BGS5_9ARCH
cytidyltransferase-like protein
Cytidyltransferase-like protein {ECO:0000313|EMBL:AFS83436.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
13_1_40cm_2_scaffold_2057_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7741..8040
DNA (300bp) protein (100aa)
hypothetical protein id=14427436 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_2057_12
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8043..8324)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB79_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83433.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_2057_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8331..9446)
DNA (1116bp) protein (372aa)
trpS; tryptophan--tRNA ligase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:AFU59281.1}; EC=6.1.1.2 {ECO:0000313|EMBL:AFU59281.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae
Tryptophan--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID25_NITGG
13_1_40cm_2_scaffold_2057_14

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9499..10932
DNA (1434bp) protein (478aa)
pheS; phenylalanine--tRNA ligase, alpha subunit (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase, alpha subunit n=1 Tax=uncultured archaeon RepID=I3RKZ8_9ARCH rbh
Phenylalanyl-tRNA synthetase, alpha subunit {ECO:0000313|EMBL:AFK25008.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_2_scaffold_2057_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists


10923..12560
DNA (1638bp) protein (546aa)
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20) id=14427432 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20) Tax=CSP1_1_Thaumarchaeota
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
13_1_40cm_2_scaffold_2057_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

12874..13113
DNA (240bp) protein (80aa)
AsnC family transcriptional regulator n=1 Tax=uncultured archaeon RepID=I3RKZ5_9ARCH
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CDI06169.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
AsnC family transcriptional regulator
13_1_40cm_2_scaffold_2057_17

Not on your lists

13192..13797
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF17039.1}; TaxID=1456281 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_76_A03.;"
hypothetical protein id=14427430 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_2_scaffold_2057_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14064..14705)
DNA (642bp) protein (214aa)
hypothetical protein id=14427429 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_2057_19

Not on your lists

15155..15688
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL24560.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_2_scaffold_2057_20

Not on your lists

15714..16682
DNA (969bp) protein (323aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=uncultured archaeon RepID=I3RKY9_9ARCH
putative pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
13_1_40cm_2_scaffold_2057_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

16679..17296
DNA (618bp) protein (206aa)
pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 (EC:2.6.-.-)
SNO glutamine amidotransferase id=14427425 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon rbh
SNO glutamine amidotransferase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_2057_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

17369..18130
DNA (762bp) protein (254aa)
aconitate hydratase (EC:4.2.1.3) id=14427428 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
aconitate hydratase (EC:4.2.1.3) Tax=CSP1_1_Thaumarchaeota
aco; aconitate hydratase (EC:4.2.1.3)
Displaying 24 items

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