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13_1_40cm_2_scaffold_3438

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3438_1

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comp(2..94)
DNA (93bp) protein (31aa)
toprim domain protein
DNA primase {ECO:0000313|EMBL:AIE96421.1}; TaxID=1455941 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_79_B02.;"
DNA primase id=14427974 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_3438_2

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comp(168..542)
DNA (375bp) protein (125aa)
Putative Toprim domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4F9_9ARCH
Toprim domain protein {ECO:0000313|EMBL:KFM14980.1}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-O1
TOPRIM domain-containing protein
13_1_40cm_2_scaffold_3438_3
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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589..1278
DNA (690bp) protein (230aa)
Glutamine amidotransferase class-I n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKL6_9ARCH
Glutamine amidotransferase class-I {ECO:0000313|EMBL:EGG42025.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus N
class I glutamine amidotransferase
13_1_40cm_2_scaffold_3438_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1389..3512
DNA (2124bp) protein (708aa)
Putative CoA-binding domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATQ7_9ARCH rbh
Putative CoA-binding domain protein {ECO:0000313|EMBL:CDI06027.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
CoA-binding domain-containing protein
13_1_40cm_2_scaffold_3438_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3538..4299
DNA (762bp) protein (254aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
enoyl-CoA hydratase/isomerase id=14427976 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
enoyl-CoA hydratase/isomerase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_3438_6

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4378..4728
DNA (351bp) protein (117aa)
GMP synthase protein {ECO:0000313|EMBL:KFM19587.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KFM19587.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Ma
Iron-sulfur cluster assembly accessory protein n=2 Tax=Nitrosopumilaceae RepID=K0B768_9ARCH
iron-sulfur cluster assembly accessory protein
13_1_40cm_2_scaffold_3438_7
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4788..5015)
DNA (228bp) protein (76aa)
AsnC family transcriptional regulator n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BES0_9ARCH
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AFS83557.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopu
13_1_40cm_2_scaffold_3438_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(5048..6295)
DNA (1248bp) protein (416aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU24_9ARCH
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_2_scaffold_3438_9

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comp(6292..6651)
DNA (360bp) protein (120aa)
sec-independent translocation protein mttA/Hcf106 id=14427986 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Sec-independent translocation protein mttA/Hcf106 (TatA) {ECO:0000313|EMBL:AIF18254.1}; TaxID=1456303 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeot
hypothetical protein
13_1_40cm_2_scaffold_3438_10

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comp(6797..7486)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM17681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
type 11 methyltransferase id=14427984 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
Methyltransferase type 11
13_1_40cm_2_scaffold_3438_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7521..8471)
DNA (951bp) protein (317aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein Tax=CSP1_1_Thaumarchaeota
3-beta hydroxysteroid dehydrogenase/isomerase family protein id=14427981 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
putative nucleoside-diphosphate sugar epimerase
13_1_40cm_2_scaffold_3438_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8505..11015
DNA (2511bp) protein (837aa)
DEAD/DEAH box helicase id=14427989 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
DEAD/DEAH box helicase Tax=CSP1_1_Thaumarchaeota
DEAD/DEAH box helicase domain protein
13_1_40cm_2_scaffold_3438_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11066..11890
DNA (825bp) protein (275aa)
short-chain dehydrogenase/reductase SDR id=14427991 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
short-chain dehydrogenase/reductase SDR Tax=CSP1_1_Thaumarchaeota
PF08643 family protein
13_1_40cm_2_scaffold_3438_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12048..13613
DNA (1566bp) protein (522aa)
2-alkenal reductase id=14427992 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
2-alkenal reductase Tax=CSP1_1_Thaumarchaeota
2-alkenal reductase
13_1_40cm_2_scaffold_3438_15
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13793..14470
DNA (678bp) protein (226aa)
Integrase family protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2I1_NITMS
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ABX13220.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain S
Displaying 15 items

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