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13_1_40cm_2_scaffold_5222

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5222_1
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3..1208)
DNA (1206bp) protein (402aa)
Aminotransferase class I and II n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A229_NITMS
class I/II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ABX12442.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (s
13_1_40cm_2_scaffold_5222_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1212..2309)
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5) id=14428504 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
13_1_40cm_2_scaffold_5222_3
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2424..3245
DNA (822bp) protein (274aa)
GCN5-related N-acetyltransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KL25_9ARCH
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGG41924.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nit
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_5222_4

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3242..3649
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D3U1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF15285.1}; TaxID=1456248 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_B05.;"
13_1_40cm_2_scaffold_5222_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3646..4914)
DNA (1269bp) protein (423aa)
3-phosphoshikimate 1-carboxyvinyltransferase id=14428505 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
3-phosphoshikimate 1-carboxyvinyltransferase Tax=CSP1_1_Thaumarchaeota
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_40cm_2_scaffold_5222_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4904..5758)
DNA (855bp) protein (285aa)
shikimate kinase id=14428506 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
shikimate kinase Tax=CSP1_1_Thaumarchaeota
shikimate kinase
13_1_40cm_2_scaffold_5222_7

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comp(5761..6582)
DNA (822bp) protein (274aa)
shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] id=14428507 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM24087.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
shikimate 5-dehydrogenase
13_1_40cm_2_scaffold_5222_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6907..7587)
DNA (681bp) protein (227aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KI40_9ARCH
3-dehydroquinate dehydratase
13_1_40cm_2_scaffold_5222_9
unknown

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comp(7603..7917)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_2_scaffold_5222_10
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8073..8255
DNA (183bp) protein (61aa)
DNA-binding protein n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037804A2
albA; DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122, ECO:0000313|EMBL:AJM91859.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" sour
13_1_40cm_2_scaffold_5222_11
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8224..8370
DNA (147bp) protein (49aa)
DNA/RNA-binding protein Alba n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAC3_9ARCH
DNA/RNA-binding protein AlbA
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
13_1_40cm_2_scaffold_5222_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8499..9344
DNA (846bp) protein (282aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaera
Putative DNA methylase N-4/N-6 domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB54_NITGG
putative DNA methylase N-4/N-6 domain protein
13_1_40cm_2_scaffold_5222_13

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9403..9606
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037C9888
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE99980.1}; TaxID=1455995 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_126_H01.;"
13_1_40cm_2_scaffold_5222_14

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comp(9755..9892)
DNA (138bp) protein (46aa)
Ammonia monooxygenase/methane monooxygenase subunit C n=3 Tax=Archaea RepID=K0BEI5_9ARCH
amoC; Ammonia monooxygenase, subunit C
Ammonia monooxygenase/methane monooxygenase, subunit C (AmoC) {ECO:0000313|EMBL:AIF09046.1}; TaxID=1456129 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarc
13_1_40cm_2_scaffold_5222_15
unknown

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comp(10047..10187)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_2_scaffold_5222_16
unknown

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comp(10381..10665)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_2_scaffold_5222_17
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10914..11969)
DNA (1056bp) protein (352aa)
aroB; 3-dehydroquinate synthase (EC:1.4.1.24)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244, ECO:0000313|EMBL:AJM92934.1}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244, ECO:00003
3-dehydroquinate synthase id=14428510 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
13_1_40cm_2_scaffold_5222_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11956..12678)
DNA (723bp) protein (241aa)
phospho-2-dehydro-3-deoxyheptonate aldolase id=14428511 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=CSP1_1_Thaumarchaeota
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_40cm_2_scaffold_5222_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13124..13576)
DNA (453bp) protein (151aa)
response regulator receiver protein id=14428264 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
response regulator receiver protein Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_5222_20
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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13886..14338
DNA (453bp) protein (151aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EGB08360.1}; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmf
13_1_40cm_2_scaffold_5222_21

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14407..15495
DNA (1089bp) protein (363aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanth
Putative Radical SAM superfamily protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3B16 RepID=B3T792_9ARCH rbh
radical SAM protein
13_1_40cm_2_scaffold_5222_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15434..16876)
DNA (1443bp) protein (481aa)
UbiD family decarboxylase id=14428513 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
UbiD family decarboxylase Tax=CSP1_1_Thaumarchaeota
UbiD family decarboxylase
Displaying 22 items

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