ggKbase home page

13_1_40cm_2_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 49 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_34_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

3..1196
DNA (1194bp) protein (398aa)
carboxyl transferase Tax=CSP1_1_Thaumarchaeota
carboxyl transferase id=14427502 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
carboxyl transferase domain protein
13_1_40cm_2_scaffold_34_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

1203..2696
DNA (1494bp) protein (498aa)
carbamoyl-phosphate synthase L chain ATP-binding protein id=14427501 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
carbamoyl-phosphate synthase L chain ATP-binding protein Tax=CSP1_1_Thaumarchaeota
carbamoyl-phosphate synthase L chain ATP-binding protein
13_1_40cm_2_scaffold_34_3

Not on your lists

2698..3210
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003631778
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AIF13911.1}; TaxID=1456223 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_
biotin/lipoyl attachment domain-containing protein
13_1_40cm_2_scaffold_34_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3253..3717)
DNA (465bp) protein (155aa)
peroxiredoxin id=14427499 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peroxiredoxin Tax=CSP1_1_Thaumarchaeota
peroxiredoxin
13_1_40cm_2_scaffold_34_5
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

3856..4272
DNA (417bp) protein (139aa)
NADH-ubiquinone oxidoreductase subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] id=14427498 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 {ECO:0000313|EMBL:EPA04856.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" s
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
13_1_40cm_2_scaffold_34_6
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

Not on your lists

4316..4843
DNA (528bp) protein (176aa)
NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0G5_9ARCH
NADH-quinone oxidoreductase, B subunit
NADH-quinone oxidoreductase, B subunit {ECO:0000313|EMBL:AJA92337.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_2_scaffold_34_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

4846..5517
DNA (672bp) protein (224aa)
NADH-ubiquinone oxidoreductase, subunit C {ECO:0000313|EMBL:CDI06270.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDI06270.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" sourc
NADH-ubiquinone oxidoreductase subunit C (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase, subunit C n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS2_9ARCH
13_1_40cm_2_scaffold_34_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

5519..6010
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase subunit D {ECO:0000313|EMBL:CDI06269.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CDI06269.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="
NADH-quinone oxidoreductase subunit D n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUP4_9ARCH
NADH dehydrogenase
13_1_40cm_2_scaffold_34_9

Not on your lists

6028..6585
DNA (558bp) protein (186aa)
NADH-ubiquinone oxidoreductase subunit D (NuoD) {ECO:0000313|EMBL:AIF04357.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF04357.1};; TaxID=1456050 species="Archaea; Thaumarchaeota; environmental samples.;" sourc
NADH-ubiquinone oxidoreductase subunit D (EC:1.6.5.3)
Putative Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Fragment) n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97P9 RepID=B3T3F1_9ARCH
13_1_40cm_2_scaffold_34_10
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

6586..7887
DNA (1302bp) protein (434aa)
NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU06_9ARCH rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:EGP93009.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitros
NADH dehydrogenase
13_1_40cm_2_scaffold_34_11
Cenarchaeum symbiosum, Cenarchaeum, Cenarchaeales, Thaumarchaeota, Archaea

Not on your lists

7884..8381
DNA (498bp) protein (166aa)
NADH-ubiquinone oxidoreductase subunit I (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase, subunit I {ECO:0000313|EMBL:ABK78287.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABK78287.1};; TaxID=414004 species="Archaea; Thaumarchaeota; Cenarchaeales; Cenarchaeaceae; Cenarc
NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RY70_CENSY rbh
13_1_40cm_2_scaffold_34_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

8374..8886
DNA (513bp) protein (171aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU45_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:CDI06266.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
13_1_40cm_2_scaffold_34_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

8867..9172
DNA (306bp) protein (102aa)
NADH dehydrogenase subunit K {ECO:0000313|EMBL:EPA05552.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EPA05552.1};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus N
ndhE; NAD(P)H-quinone oxidoreductase subunit 4L (EC:1.6.5.-)
NADH dehydrogenase subunit K n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EM07_9ARCH
13_1_40cm_2_scaffold_34_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9172..10725
DNA (1554bp) protein (518aa)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E2Q7_9ARCH rbh
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:EPA05555.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.
proton-translocating NADH-quinone oxidoreductase subunit M
13_1_40cm_2_scaffold_34_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

10729..12813
DNA (2085bp) protein (695aa)
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:CDI06263.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CDI06263.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thauma
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUX1_9ARCH rbh
Proton-translocating NADH-quinone oxidoreductase subunit L
13_1_40cm_2_scaffold_34_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

12824..14311
DNA (1488bp) protein (496aa)
proton-translocating NADH-quinone oxidoreductase subunit N id=14427487 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
proton-translocating NADH-quinone oxidoreductase subunit N Tax=CSP1_1_Thaumarchaeota
proton-translocating NADH-quinone oxidoreductase, chain N
13_1_40cm_2_scaffold_34_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14301..15152)
DNA (852bp) protein (284aa)
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] id=14427486 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=CSP1_1_Thaumarchaeota
polyprenyl synthetase
13_1_40cm_2_scaffold_34_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

15380..16018
DNA (639bp) protein (213aa)
TENA/THI-4 domain-containing protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] id=14427485 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
TENA/THI-4 domain-containing protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=CSP1_1_Thaumarchaeota
TENA/THI-4 domain protein
13_1_40cm_2_scaffold_34_trna_1
unknown

Not on your lists

16061..16134
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_34_19
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

16457..17020
DNA (564bp) protein (188aa)
2-alkenal reductase (EC:1.3.1.74)
TATA-box-binding protein n=2 Tax=Nitrosopumilaceae RepID=A9A365_NITMS rbh
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
13_1_40cm_2_scaffold_34_20

Not on your lists

comp(17041..17649)
DNA (609bp) protein (203aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; Orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase id=14427484 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_34_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

17700..18788
DNA (1089bp) protein (363aa)
hypothetical protein id=14427483 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_34_22

Not on your lists

comp(18777..19844)
DNA (1068bp) protein (356aa)
membrane-associated Zn-dependent protease id=14427482 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Membrane-associated Zn-dependent protease {ECO:0000313|EMBL:AIF17078.1}; TaxID=1456281 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_76_A03.;"
peptidase M50
13_1_40cm_2_scaffold_34_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

19937..20437
DNA (501bp) protein (167aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] id=14427481 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=CSP1_1_Thaumarchaeota
ribosomal-protein-alanine acetyltransferase
13_1_40cm_2_scaffold_34_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

20472..20696
DNA (225bp) protein (75aa)
transcriptional regulator id=14427480 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
transcriptional regulator Tax=CSP1_1_Thaumarchaeota
transcriptional regulator
13_1_40cm_2_scaffold_34_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(20697..21524)
DNA (828bp) protein (276aa)
hypothetical protein id=14427479 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
ribosomal protein L11 methyltransferase-like protein
13_1_40cm_2_scaffold_34_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(21530..23314)
DNA (1785bp) protein (595aa)
ATPase RIL id=14427478 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ATPase RIL Tax=CSP1_1_Thaumarchaeota
ATPase RIL
13_1_40cm_2_scaffold_34_27
unknown

Not on your lists

comp(23509..23766)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_34_28
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(23973..24371)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1G0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EIJ65553.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria B
hypothetical protein
13_1_40cm_2_scaffold_34_29
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

24486..26153
DNA (1668bp) protein (556aa)
ribulose-phosphate 3-epimerase id=14427474 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
ribulose-phosphate 3-epimerase Tax=CSP1_1_Thaumarchaeota
putative ribulose-phosphate 3-epimerase
Displaying items 1-30 of 49 in total

View Taxonomy