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13_1_40cm_2_scaffold_1426

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1426_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..2920)
DNA (2919bp) protein (973aa)
Copper resistance family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG1_NITGG
putative copper export protein
Putative copper export protein {ECO:0000313|EMBL:AIF84887.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidat
13_1_40cm_2_scaffold_1426_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3103..4005
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84862.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_2_scaffold_1426_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4032..4736
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQL9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84888.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_2_scaffold_1426_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5003..5737
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60154.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_2_scaffold_1426_5
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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6089..7126
DNA (1038bp) protein (346aa)
Transcription initiation factor IIB n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EMC8_9ARCH
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilacea
transcription initiation factor TFIIB
13_1_40cm_2_scaffold_1426_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7197..9308)
DNA (2112bp) protein (704aa)
ATPase AAA id=14428590 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ATPase AAA Tax=CSP1_1_Thaumarchaeota
ATPase AAA
13_1_40cm_2_scaffold_1426_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9525..10199)
DNA (675bp) protein (225aa)
psmA2; proteasome, subunit alpha (EC:3.4.25.1)
Proteasome, subunit alpha {ECO:0000313|EMBL:AIC16483.1}; EC=3.4.25.1 {ECO:0000313|EMBL:AIC16483.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerace
Proteasome, subunit alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY1_NITGG
13_1_40cm_2_scaffold_1426_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10200..10775)
DNA (576bp) protein (192aa)
psmB3; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL55_NITGG
13_1_40cm_2_scaffold_1426_9
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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11075..11527
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EBX9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06831.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_2_scaffold_1426_10
unknown

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comp(11540..11740)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_1426_11

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11825..12079
DNA (255bp) protein (85aa)
Transcriptional regulator, AsnC family n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D328_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK88361.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
13_1_40cm_2_scaffold_1426_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12083..12706
DNA (624bp) protein (208aa)
nfi; endonuclease V (EC:3.1.21.7) id=14427754 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
nfi; endonuclease V (EC:3.1.21.7) Tax=CSP1_1_Thaumarchaeota
nfi; endonuclease V (EC:3.1.21.7)
13_1_40cm_2_scaffold_1426_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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12775..13707
DNA (933bp) protein (311aa)
Putative transcription initiation factor TFIIB n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUX0_9ARCH
Putative transcription initiation factor TFIIB {ECO:0000313|EMBL:CDI06350.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
tfb; Transcription initiation factor IIB
13_1_40cm_2_scaffold_1426_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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13872..14126
DNA (255bp) protein (85aa)
hypothetical protein id=14428560 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_1426_15
unknown

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14150..14635
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_2_scaffold_1426_16
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14632..14922)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:AJW70965.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_2_scaffold_1426_17
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

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comp(14967..15596)
DNA (630bp) protein (210aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PIJ8_9CYAN
HAD-superfamily hydrolase, subfamily IA, variant 1 Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
HAD-superfamily hydrolase
13_1_40cm_2_scaffold_1426_18
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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15743..16252
DNA (510bp) protein (170aa)
Tetratricopeptide repeat protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3CZM2_9ARCH
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EIJ64915.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
hypothetical protein
13_1_40cm_2_scaffold_1426_19
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16414..17469)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Nitrosopumilaceae RepID=K0B6J6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81109.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_2_scaffold_1426_20
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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17744..18949
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BFT4_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83191.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_1426_21
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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18981..19436
DNA (456bp) protein (152aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA; Peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase msrA n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS96_9ARCH
13_1_40cm_2_scaffold_1426_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19523..20092
DNA (570bp) protein (190aa)
MEDS: MEthanogen/methylotroph, DcmR Sensory domain
MEDS: MEthanogen/methylotroph, DcmR Sensory domain {ECO:0000313|EMBL:AIF84128.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_2_scaffold_1426_23
unknown

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comp(20654..20878)
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 23 items

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