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13_1_40cm_2_scaffold_23677

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_23677_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_2_scaffold_23677_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(603..1667)
DNA (1065bp) protein (355aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_23677_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1718..2266)
DNA (549bp) protein (183aa)
Secreted protein n=1 Tax=sediment metagenome RepID=D9PI60_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_23677_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2502..3665)
DNA (1164bp) protein (388aa)
lpxB; lipid-A-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] id=12557818 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182)
13_1_40cm_2_scaffold_23677_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3662..6052)
DNA (2391bp) protein (797aa)
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
peptidase M16 domain-containing protein id=12557819 bin=CNBR_ACIDO species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
peptidase
13_1_40cm_2_scaffold_23677_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6049..7452)
DNA (1404bp) protein (468aa)
peptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
peptidase M16 domain-containing protein id=12557820 bin=CNBR_ACIDO species=Gloeobacter kilaueensis genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M16
13_1_40cm_2_scaffold_23677_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7460..8263)
DNA (804bp) protein (268aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_2_scaffold_23677_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8242..9243)
DNA (1002bp) protein (334aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_cu
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] id=12557821 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
13_1_40cm_2_scaffold_23677_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9246..10307)
DNA (1062bp) protein (354aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_cu
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] id=12557821 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
13_1_40cm_2_scaffold_23677_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10467..10955)
DNA (489bp) protein (163aa)
id=12557822 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_2_scaffold_23677_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(11161..11307)
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Bacillus oceanisediminis RepID=UPI0002F952F1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_2_scaffold_23677_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11664..12563)
DNA (900bp) protein (300aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=12556664 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_23677_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12582..13757
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NT97_GRAMM
hypothetical protein; K09151 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_23677_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13761..14114
DNA (354bp) protein (118aa)
endonuclease IV (EC:3.1.21.-); K01151 deoxyribonuclease IV [EC:3.1.21.2] id=12556876 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative endonuclease IV (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
apurinic endonuclease Apn1 (EC:3.1.21.2)
Displaying 14 items

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