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13_1_40cm_2_scaffold_2670

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2670_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..1035
DNA (1035bp) protein (345aa)
MutS2 family protein; K07456 DNA mismatch repair protein MutS2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Smr protein/MutS2; K07456 DNA mismatch repair protein MutS2 id=12556620 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MutS2 family protein
13_1_40cm_2_scaffold_2670_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1035..2807
DNA (1773bp) protein (591aa)
DNA primase catalytic subunit (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA primase catalytic subunit (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] id=12556621 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA primase
13_1_40cm_2_scaffold_2670_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2816..4534
DNA (1719bp) protein (573aa)
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
sigma 38, RpoS
13_1_40cm_2_scaffold_2670_4
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(4868..7192)
DNA (2325bp) protein (775aa)
Macrolide transporter ATP-binding /permease protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QSA7_9CYAN
macrolide transporter ATP-binding/permease protein
Macrolide transporter ATP-binding /permease protein {ECO:0000313|EMBL:AGY60600.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter ki
13_1_40cm_2_scaffold_2670_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7277..8035
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH82_KORVE
hypothetical protein; K07164 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_2_scaffold_2670_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8058..8492
DNA (435bp) protein (145aa)
ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Ribonuclease HI n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F185_ACIC5
Ribonuclease HI
13_1_40cm_2_scaffold_2670_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8571..9371)
DNA (801bp) protein (267aa)
Multi-copper polyphenol oxidoreductase, laccase; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K05810 conserved hypothetical protein id=12556625 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_2670_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9536..9853
DNA (318bp) protein (106aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Holo-[acyl-carrier-protein] synthase id=3804311 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
holo-acyl-carrier-protein synthase
13_1_40cm_2_scaffold_2670_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10339..10641
DNA (303bp) protein (101aa)
id=12556555 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
id=12556555 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_2670_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10714..12486)
DNA (1773bp) protein (591aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Radical SAM domain protein id=4736524 bin=GWC2_Nitrospirae_57_13 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
radical SAM domain-containing protein
13_1_40cm_2_scaffold_2670_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12834..14246)
DNA (1413bp) protein (471aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division protein FtsZ; K03531 cell division protein FtsZ id=12556629 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
cell division protein FtsZ
13_1_40cm_2_scaffold_2670_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14405..15643)
DNA (1239bp) protein (413aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division protein FtsA; K03590 cell division protein FtsA id=12556630 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
cell division protein FtsA
13_1_40cm_2_scaffold_2670_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15751..16647)
DNA (897bp) protein (299aa)
cell division septal protein-like; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cell division septal protein-like; K03589 cell division protein FtsQ id=12556631 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division septal protein-like
13_1_40cm_2_scaffold_2670_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16644..18041)
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=12556632 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_2_scaffold_2670_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18400..19488)
DNA (1089bp) protein (363aa)
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylgluco
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=12556633 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
13_1_40cm_2_scaffold_2670_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19510..20610)
DNA (1101bp) protein (367aa)
cell cycle protein; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cell cycle protein; K03588 cell division protein FtsW id=12556634 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell cycle protein
13_1_40cm_2_scaffold_2670_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21123..22481)
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) id=12556635 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramoylalanine--D-glutamate ligase
13_1_40cm_2_scaffold_2670_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22495..23583)
DNA (1089bp) protein (363aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=12556636 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phospho-N-acetylmuramoyl-pentapeptide-transferase
13_1_40cm_2_scaffold_2670_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(23583..25028)
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_12_FUL
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=12556637 bin=CNBR_ACIDO species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
13_1_40cm_2_scaffold_2670_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(25025..26545)
DNA (1521bp) protein (507aa)
MurE; UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=12556638 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
13_1_40cm_2_scaffold_2670_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(26542..28536)
DNA (1995bp) protein (665aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=12556639 bin=CNBR_ACIDO species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
peptidoglycan glycosyltransferase
13_1_40cm_2_scaffold_2670_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(28645..29031)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
id=12556640 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ftsL; cell division septum formation protein FtsL
13_1_40cm_2_scaffold_2670_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(29118..30020)
DNA (903bp) protein (301aa)
S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
16S rRNA methyltransferase id=12556641 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_2670_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(30020..30460)
DNA (441bp) protein (147aa)
putative MraZ protein; K03925 MraZ protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative MraZ protein; K03925 MraZ protein id=12556642 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MraZ protein
13_1_40cm_2_scaffold_2670_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

30796..31935
DNA (1140bp) protein (380aa)
Ribosome-binding ATPase YchF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILQ1_KORVE
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ychF; GTP-dependent nucleic acid-binding protein EngD
13_1_40cm_2_scaffold_2670_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

31948..32997
DNA (1050bp) protein (350aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
group 1 glycosyl transferase id=12556643 bin=CNBR_ACIDO species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
group 1 glycosyl transferase
13_1_40cm_2_scaffold_2670_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

33004..33864
DNA (861bp) protein (287aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
family 2 glycosyl transferase id=12556645 bin=CNBR_ACIDO species=Thioalkalivibrio sp. AKL7 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
family 2 glycosyl transferase
13_1_40cm_2_scaffold_2670_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

33861..34592
DNA (732bp) protein (244aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=12556647 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
13_1_40cm_2_scaffold_2670_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

34628..35434
DNA (807bp) protein (269aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
glycosyl transferase family protein id=12556649 bin=CNBR_ACIDO species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyl transferase family protein
13_1_40cm_2_scaffold_2670_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

35431..35568
DNA (138bp) protein (46aa)
putative nucleotide sugar epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T8Z8_9DELT
putative nucleotide sugar epimerase/dehydratase
Displaying 30 items

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