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13_1_40cm_2_scaffold_3971

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3971_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(293..2212)
DNA (1920bp) protein (640aa)
Flp pilus assembly protein TadD, contains TPR repeats Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
TPR domain-containing protein id=12555620 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_3971_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2263..2433
DNA (171bp) protein (57aa)
hypothetical protein; K09791 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K09791 hypothetical protein id=12555621 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_3971_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

2539..3642
DNA (1104bp) protein (368aa)
rfaF/gmhB; bifunctional lipopolysaccharide heptosyltransferase II/D, D-heptose 1,7-bisphosphate phosphatase (EC:2.4.-.- 3.1.3.-); K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Aci
putative lipopolysaccharide heptosyltransferase III (EC:2.4.1.-); K02849 heptosyltransferase III [EC:2.4.-.-] id=12555622 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
membrane protein
13_1_40cm_2_scaffold_3971_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3696..5759)
DNA (2064bp) protein (688aa)
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] Tax=RBG_16_RIF_WS3X_71_46_curated
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] id=24502008 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
M3 family peptidase
13_1_40cm_2_scaffold_3971_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5818..7038
DNA (1221bp) protein (407aa)
O-antigen polymerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
O-antigen polymerase id=12555623 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-antigen polymerase
13_1_40cm_2_scaffold_3971_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7123..8151
DNA (1029bp) protein (343aa)
hypothetical protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE id=4780015 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_1_40cm_2_scaffold_3971_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8462..8662)
DNA (201bp) protein (67aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021S6_SOLUE
serine/threonine protein kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
serine/threonine protein kinase
13_1_40cm_2_scaffold_3971_8
unknown

Not on your lists

8706..8822
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_3971_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9256..9789)
DNA (534bp) protein (178aa)
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=12555627 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
13_1_40cm_2_scaffold_3971_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9777..10187)
DNA (411bp) protein (137aa)
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=12555627 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Displaying 10 items

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