ggKbase home page

13_1_40cm_2_scaffold_10074_4

Organism: 13_1_40CM_2_Acidobacteria_64_6

partial RP 45 / 55 MC: 10 BSCG 37 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1863..2642

Top 3 Functional Annotations

Value Algorithm Source
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 262.0
  • Bit_score: 327
  • Evalue 1.30e-86
TonB family protein id=12554075 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 268.0
  • Bit_score: 171
  • Evalue 1.10e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGACGTCACCGATGTGCTTCGCGACCGGATGCAGGCCCCCGCTGGACTTCAGCGAATGGTGGCGGTGTCGGTGGCGGCGCATGTCGTGTTCGGCGCGGGCCTCCTCCTGGCGCCTGCTCGGTTTCTTGGTCGCGAGTCGGCCGCGCCGCGGACGGTGATGACGATTTCGCTCGGCGGCAATGCGGGCGCCGACAGCGGCGGCATGACGCAAATGGGCGGCCGTGCCGTGCAGGTCCAGACGCCGCCCGAGGAGGCCGCCAAGCGCGAGGCGGTCCGGCCGCCTGCCGCGAAAGCGCCCGAGATGGTCCTTCCCCGCCGCGACGTCAAGGTGAGCAAAACGACGCCTGCGCCGAACGTGACGCAGGCGCCCGATGACGCGCGTGGCCGCACACCAACGAGGGGCGCTCAGACCGCCAAGGGCAGCACGAGCGCGGAAACCGGCATACGGGGCCAAGGATTCGGACTGTCGAGCGGTCAGGGCATTGGCGGCACGCTCGACGTCGCGAACTTCTGTTGCCCCGACTATGTGCAGACGATGGTCCAGCGGATTAGAAGCGTCTGGGCGCAGAACCAAGGCGTCACCGCACAAACCATCATCAAGTTCACCATCCAACGTGACGGCAAGATCACCGACACGATCGTCGAAGCGAGCAGCGGCAATGACGCGCTCGATCTCGCCGCGCGCCGCGCCGTCGCCGTCACGCAACTGCCGCCGCTCCCGGATGCGTATCCCAATCCCTCGCTGCCCGTCCACCTCACATTCAAGTACGAAAGATGA
PROTEIN sequence
Length: 260
MDVTDVLRDRMQAPAGLQRMVAVSVAAHVVFGAGLLLAPARFLGRESAAPRTVMTISLGGNAGADSGGMTQMGGRAVQVQTPPEEAAKREAVRPPAAKAPEMVLPRRDVKVSKTTPAPNVTQAPDDARGRTPTRGAQTAKGSTSAETGIRGQGFGLSSGQGIGGTLDVANFCCPDYVQTMVQRIRSVWAQNQGVTAQTIIKFTIQRDGKITDTIVEASSGNDALDLAARRAVAVTQLPPLPDAYPNPSLPVHLTFKYER*