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13_1_40cm_2_scaffold_10074

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10074_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(3..509)
DNA (507bp) protein (169aa)
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=12554078 bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA replication and repair protein RecN
13_1_40cm_2_scaffold_10074_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

564..1397
DNA (834bp) protein (278aa)
protein TolQ; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
MotA/TolQ/ExbB proton channel; K03562 biopolymer transport protein TolQ id=12554077 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein TolQ
13_1_40cm_2_scaffold_10074_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1398..1859
DNA (462bp) protein (154aa)
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
protein TolR; K03560 biopolymer transport protein TolR id=12554076 bin=CNBR_ACIDO species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biopolymer transport protein ExbD/TolR
13_1_40cm_2_scaffold_10074_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

1863..2642
DNA (780bp) protein (260aa)
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
TonB family protein id=12554075 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_10074_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

2639..4000
DNA (1362bp) protein (454aa)
tolB protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
beta-propeller repeat-containing to-pal system protein TolB; K03641 TolB protein id=12554074 bin=CNBR_ACIDO species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-propeller repeat-containing to-pal system protein TolB
13_1_40cm_2_scaffold_10074_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4012..4587
DNA (576bp) protein (192aa)
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein id=12554073 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
OmpA/MotB domain protein
13_1_40cm_2_scaffold_10074_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4592..5227
DNA (636bp) protein (212aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12554072 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tol-Pal system YbgF
Displaying 7 items

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