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13_1_40cm_2_scaffold_1216_1

Organism: 13_1_40CM_2_Acidobacteria_64_6

partial RP 45 / 55 MC: 10 BSCG 37 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 3..251

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma54 specific transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_c similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 77.0
  • Bit_score: 118
  • Evalue 4.80e-24
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12554124 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 80.0
  • Bit_score: 95
  • Evalue 2.40e-17
putative NtrC family two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 71.0
  • Bit_score: 71
  • Evalue 1.80e-10

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 249
GTGCGGTCACCGTCCTCGTCGAGCGCGAGCGGCGGGCTTGCCACACCGAAGCCTGGGAGCGGAGCCGGCCAGGCGGAGGCTGGCACGCTGCGCGAGTTCAAGGAGAACGCCGAGCGTGCGTTCCTCGTCGGCAAGCTGCGCGAGAACGGCTGGAACATCTCCAAGACCGCCGAAGTCATCGGCACGCCGCGCAGTAATCTCTACAAGAAGCTCGAACAGTACCAAATCAGCCAGGACAGTGATGGCTGA
PROTEIN sequence
Length: 83
VRSPSSSSASGGLATPKPGSGAGQAEAGTLREFKENAERAFLVGKLRENGWNISKTAEVIGTPRSNLYKKLEQYQISQDSDG*