ggKbase home page

13_1_40cm_2_scaffold_1216_11

Organism: 13_1_40CM_2_Acidobacteria_64_6

partial RP 45 / 55 MC: 10 BSCG 37 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 8416..9933

Top 3 Functional Annotations

Value Algorithm Source
two component sigma54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 487.0
  • Bit_score: 661
  • Evalue 9.40e-187
two component sigma54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=12554116 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 303.0
  • Bit_score: 348
  • Evalue 1.30e-92
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 391.0
  • Bit_score: 259
  • Evalue 2.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGCCGGCGCTCGATTCATGCGCGGATCCGCCGCCAGGGGTTCCAGTGAACGCAGTGAACGCAGGGAACGCAGTGAACCATGTCCCGCGTCAACGCGACCGTCGCCAGGCGCTGTGCGAGATGCTCGCGACGCTCACACGGTTCCTCGACAAAGGGCAGGACATCTCGCTGATGCGCGGTGCATTCGAGGAAATGCTGCGTCGCGTCGTACCGGTGCGGGCGATTCAACTACGTGAGTCGAACAGCCGATGGACGGGCCGGCTGGCCGGTGCGGACGGCATCGAGTCGATTGCGCTCGAAGTCCCCGGCAGCGATCCCTCGACGCGCGGCCTTCTCGAGGCGACCTTCGATCCCGGTTGCCGCCTGGGCGATTGGGATTTCCAAATGCTCGGCACCGCCACGCACGTGGGCGCGCTCGTGCTCGAAATCGAGCGGTCGTGGACGCAGCTCGCGCGTGCGGGACTCCTCGATGGTCATCGAGCTCGTCGCGATGGCGCGGCGCCGATCATCGGGTCGACCGACATCATGCAGGCCCTGCGGTCGACGATCGAGCGTCTGGCGGGAACCGACTTCACCGTACTCCTGGAAGGCGAGAGCGGCGTCGGCAAGGAGCTGGTCGCGCGCCAAATCCACGACGTCAGTCGCCGCCGCAACGGACCATTCGTCGCCATCAATTGCGCGGCGCTCGTCGAAACACTGCTCGAAGCGGAGCTGTTTGGCATCGAGGAGCGCACGGCGACGGGCGTCCGCGGGCGGCGCGGGAAGTTCGAGCACGCCGACGGAGGGACCCTGTTCCTCGACGAAGTCTCGGACCTCTCGGTCTCCGCCCAGGCGAAGCTGCTGCGTGCGATTCAGGATCTGACGGTGCAGCGTGTCGGCGGCCACGCGACCCGTCGCGTCGATGTCCGCATCATCGCGGCGACGAACCGGAGTCTGGCCGGTCTCGTTGAGCGGCAGCTGTTCCGGCCCGATCTGTTCTATCGCCTGAGCGGCGTGGACATCCGCGTGCCGACGCTCAGGGAGCGCCGGCCCGACATCCTCGAGCTCGCGTGCTACTTCCTCGAGCGTCACCGGGTCGGACGCCGGTTGCGGTTGACCGCGGCGGCCGCGGACGCGATGGTCACGTACAACTGGCCGGGAAACGTCCGCGAGCTGGAACGCATGATGGAGCGCGCCGTGACCCTTGCGGAGACCGACATCATCGATCTGGACGACCTGCCGCCGACCGTGCGCGGCGGGTACTCGTCGGCCCTCGGACCGTCGCTGAAACGCAACGACACGCTCCGCATCTGGGCCTGTCGCTACGTGCGCCTCGTGGTGGAACGATGCGGTGGCAACAAGCGCGCGGCGTCGCGCGCGCTCGGCATCAGCTATCACACCCTTAAGGCATATCTTCGGTCGCCGTATTACGACCAGGCCTGCGAGAGCAGTCCTCCGGTACCGGACGATCAGGACGCAACCGCGGGCGATGGGCCATTGGAGGAACCGGAGTCGGCTGACGGGGCATCAGGAGTCTGA
PROTEIN sequence
Length: 506
MPALDSCADPPPGVPVNAVNAGNAVNHVPRQRDRRQALCEMLATLTRFLDKGQDISLMRGAFEEMLRRVVPVRAIQLRESNSRWTGRLAGADGIESIALEVPGSDPSTRGLLEATFDPGCRLGDWDFQMLGTATHVGALVLEIERSWTQLARAGLLDGHRARRDGAAPIIGSTDIMQALRSTIERLAGTDFTVLLEGESGVGKELVARQIHDVSRRRNGPFVAINCAALVETLLEAELFGIEERTATGVRGRRGKFEHADGGTLFLDEVSDLSVSAQAKLLRAIQDLTVQRVGGHATRRVDVRIIAATNRSLAGLVERQLFRPDLFYRLSGVDIRVPTLRERRPDILELACYFLERHRVGRRLRLTAAAADAMVTYNWPGNVRELERMMERAVTLAETDIIDLDDLPPTVRGGYSSALGPSLKRNDTLRIWACRYVRLVVERCGGNKRAASRALGISYHTLKAYLRSPYYDQACESSPPVPDDQDATAGDGPLEEPESADGASGV*