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13_1_40cm_2_scaffold_2048

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2048_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1..372
DNA (372bp) protein (124aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T640_9EURY
glycine/serine hydroxymethyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_2048_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(379..867)
DNA (489bp) protein (163aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_2048_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(868..1326)
DNA (459bp) protein (153aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_2048_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1334..1735)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_2048_trna_1
unknown

Not on your lists

comp(1872..1944)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_2048_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2078..3958
DNA (1881bp) protein (627aa)
rne; ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] Tax=RBG_16_Euryarchaeota_68_12_curated
Proline-rich protein n=1 Tax=Triticum aestivum RepID=Q01979_WHEAT
hypothetical protein
13_1_40cm_2_scaffold_2048_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

4007..5023
DNA (1017bp) protein (339aa)
TIGR01210 family protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD4_ACIS0
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_67_27_curated
TIGR01210 family protein
13_1_40cm_2_scaffold_2048_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5061..5399
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BUM6_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_2_scaffold_2048_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5483..5797)
DNA (315bp) protein (105aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Euryarchaeota_68_13_curated
rpl12p; 50S ribosomal protein L12
13_1_40cm_2_scaffold_2048_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(5832..6815)
DNA (984bp) protein (328aa)
50S ribosomal protein L10 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V4_9EURY
rplP0; acidic ribosomal protein P0 Tax=RBG_16_Euryarchaeota_68_12_curated
rplP0; acidic ribosomal protein P0
13_1_40cm_2_scaffold_2048_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(6824..7471)
DNA (648bp) protein (216aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
rpl1P; 50S ribosomal protein L1P Tax=RBG_16_Euryarchaeota_68_12_curated
LSU ribosomal protein L10Ae (L1p)
13_1_40cm_2_scaffold_2048_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7711..8553
DNA (843bp) protein (281aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator, TrmB-like
13_1_40cm_2_scaffold_2048_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(8566..9048)
DNA (483bp) protein (161aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
rpl11p; 50S ribosomal protein L11P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L11
13_1_40cm_2_scaffold_2048_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(9049..9996)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_68_12_curated
Putative transcription antitermination protein NusG
13_1_40cm_2_scaffold_2048_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10001..10240)
DNA (240bp) protein (80aa)
Protein translocase subunit SecE n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8P5_9EURY
secE; preprotein translocase subunit SecE Tax=RBG_16_Euryarchaeota_68_12_curated
secE; preprotein translocase subunit SecE
13_1_40cm_2_scaffold_2048_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10242..10505)
DNA (264bp) protein (88aa)
Cell division protein FtsZ (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AK81_9ZZZZ
cell division protein FtsZ Tax=RBG_16_Euryarchaeota_68_12_curated
cell division protein FtsZ
13_1_40cm_2_scaffold_2048_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10578..11150)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA
cell division protein FtsZ Tax=RBG_16_Euryarchaeota_68_12_curated
cell division protein FtsZ
Displaying 17 items

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