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13_1_40cm_2_scaffold_2487

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2487_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3..650
DNA (648bp) protein (216aa)
Marine sediment metagenome DNA, contig: S03H2_L03946 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_2_scaffold_2487_2
unknown

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comp(660..938)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_2_scaffold_2487_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1114..2301
DNA (1188bp) protein (396aa)
LPS glycosyltransferase {ECO:0000313|EMBL:ELZ24090.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
13_1_40cm_2_scaffold_2487_4
R_RIF_OD1_06_37_25b, RIF-OD1-6, Parcubacteria, Bacteria

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comp(2298..3050)
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_37_25b_curated
3-demethylubiquinone-9 3-O-methyltransferase id=3122151 bin=GWC2_Elusimicrobia_64_44 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
type 11 methyltransferase
13_1_40cm_2_scaffold_2487_5
unknown

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comp(3047..3247)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_2487_6

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comp(3632..4678)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000379E278 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF60156.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
13_1_40cm_2_scaffold_2487_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4777..5796)
DNA (1020bp) protein (340aa)
Glycosyltransferase {ECO:0000313|EMBL:AKB76701.1}; EC=2.4.1.- {ECO:0000313|EMBL:AKB76701.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Met
Glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXS9_METMA
13_1_40cm_2_scaffold_2487_8
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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5922..6944
DNA (1023bp) protein (341aa)
Glycosyl transferase, group 1 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CVY2_METMJ
glycosyl transferase, group 1
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN57532.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanocu
13_1_40cm_2_scaffold_2487_9
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(7005..7769)
DNA (765bp) protein (255aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDZ8_ACIB4
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDY35435.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).
glycosyl transferase family 2
13_1_40cm_2_scaffold_2487_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7875..9332)
DNA (1458bp) protein (486aa)
Polysaccharide biosynthesis protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNL4_ROSCS
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:KCZ72280.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Meth
polysaccharide biosynthesis protein
13_1_40cm_2_scaffold_2487_11
unknown

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9401..10291
DNA (891bp) protein (297aa)

This feature has no annotations

13_1_40cm_2_scaffold_2487_12
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

10291..10809
DNA (519bp) protein (173aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMY8_9ARCH
acetyltransferase Tax=RBG_16_Acidobacteria_64_8_curated
Acetyltransferase (Isoleucine patch superfamily)
13_1_40cm_2_scaffold_2487_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10815..11954
DNA (1140bp) protein (380aa)
Glycosyl transferase, group 1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY69_RUBXD
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
group 1 glycosyl transferase
13_1_40cm_2_scaffold_2487_14
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11986..12747)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQT6_9PLAN
WsaE {ECO:0000313|EMBL:KKR31915.1}; TaxID=1618450 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
hypothetical protein
13_1_40cm_2_scaffold_2487_15
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12752..13591)
DNA (840bp) protein (280aa)
Polysaccharide deacetylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BS0_METBF
Polysaccharide deacetylase {ECO:0000313|EMBL:AAZ70672.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
Polysaccharide deacetylase
13_1_40cm_2_scaffold_2487_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13614..14681)
DNA (1068bp) protein (356aa)
Glycosyl transferase, group 1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9R7_METTP
glycosyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase, group 1
13_1_40cm_2_scaffold_2487_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14678..15172)
DNA (495bp) protein (165aa)
glycoside hydrolase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B74D
Glycosyltransferase {ECO:0000313|EMBL:KEZ21563.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuya
hexosyltransferase; glycosyltransferase
Displaying 17 items

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