ggKbase home page

13_1_40cm_2_scaffold_3015

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3015_1
unknown

Not on your lists

1..75
DNA (75bp) protein (25aa)

This feature has no annotations

13_1_40cm_2_scaffold_3015_2
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

166..2100
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI0003771919 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB65887.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
family 5 extracellular solute-binding protein
13_1_40cm_2_scaffold_3015_3
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(2119..3165)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037FE46F
oligopeptide ABC transporter ATP-binding protein
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC92063.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violac
13_1_40cm_2_scaffold_3015_4
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(3162..4295)
DNA (1134bp) protein (378aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5W3_KORCO
dipeptide/oligopeptide/nickel ABC transporter ATPase
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:ACB07842.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryp
13_1_40cm_2_scaffold_3015_5
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4302..5339)
DNA (1038bp) protein (346aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKG6_PYRSN
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEC51399.1}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococc
13_1_40cm_2_scaffold_3015_6
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(5342..6364)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=unclassified Euryarchaeota (miscellaneous) RepID=UPI00036B42BF
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB05174.1}; Flags: Precursor;; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="
13_1_40cm_2_scaffold_3015_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


6644..7219
DNA (576bp) protein (192aa)
DNA-directed RNA polymerase subunit E (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EEDE2
13_1_40cm_2_scaffold_3015_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7223..7414
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D5438
13_1_40cm_2_scaffold_3015_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7380..7925
DNA (546bp) protein (182aa)
UPF0218 protein MBGDF03_00759 n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U0Y0_9EURY
hypothetical protein; K09735 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_2_scaffold_3015_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7928..8320
DNA (393bp) protein (131aa)
Ribosomal protein S24e n=1 Tax=mine drainage metagenome RepID=T0ZEJ1_9ZZZZ
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Euryarchaeota_68_13_curated
rps24e; 30S ribosomal protein S24
Displaying 10 items

View Taxonomy