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13_1_40cm_2_scaffold_3315

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3315_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..537)
DNA (537bp) protein (179aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13) Tax=RBG_16_Euryarchaeota_68_12_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBZ3_9EURY
13_1_40cm_2_scaffold_3315_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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967..1569
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RTE6_9CLOT
collagen triple helix repeat-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
collagen triple helix repeat protein
13_1_40cm_2_scaffold_3315_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1660..2541)
DNA (882bp) protein (294aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9) Tax=RBG_16_Euryarchaeota_68_12_curated
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBV0_9EURY
13_1_40cm_2_scaffold_3315_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2648..3151
DNA (504bp) protein (168aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_3315_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3393..4526
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380810D
digeranylgeranylglycerophospholipid reductase Tax=RBG_16_Euryarchaeota_68_12_curated
geranylgeranyl reductase family protein
13_1_40cm_2_scaffold_3315_6
unknown

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comp(4514..5293)
DNA (780bp) protein (260aa)

This feature has no annotations

13_1_40cm_2_scaffold_3315_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5392..6333
DNA (942bp) protein (314aa)
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037102BE
methylenetetrahydrofolate reductase
13_1_40cm_2_scaffold_3315_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6479..7966
DNA (1488bp) protein (496aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional purine biosynthesis protein PurH n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EL26_9FIRM
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
13_1_40cm_2_scaffold_3315_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7976..8617
DNA (642bp) protein (214aa)
purN; phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RBG_16_Euryarchaeota_68_12_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPE6_9FIRM
purN; phosphoribosylglycinamide formyltransferase, folate-dependent
13_1_40cm_2_scaffold_3315_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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9033..9533
DNA (501bp) protein (167aa)
Putative GAF sensor protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C712_SPHTD
GAF domain-containing protein; K07170 GAF domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
putative GAF sensor protein
13_1_40cm_2_scaffold_3315_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(9550..10095)
DNA (546bp) protein (182aa)
Transcriptional regulator, ArsR family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S382_FERPA
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
ArsR family transcriptional regulator
13_1_40cm_2_scaffold_3315_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(10111..10374)
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_3315_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(10427..11431)
DNA (1005bp) protein (335aa)
Marine sediment metagenome DNA, contig: S03H2_S08248 Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_3315_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(11620..11841)
DNA (222bp) protein (74aa)
Putative RNA-binding protein, contains TRAM domain n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZJ4_METHD
putative RNA-binding protein, contains TRAM domain Tax=RBG_16_Euryarchaeota_68_12_curated
putative RNA-binding protein, contains TRAM domain
13_1_40cm_2_scaffold_3315_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11963..12367)
DNA (405bp) protein (135aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_2_scaffold_3315_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(12500..12790)
DNA (291bp) protein (97aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_3315_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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13151..13363
DNA (213bp) protein (71aa)
ferredoxin n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=UPI00001660D7
ferredoxin Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ferredoxin
13_1_40cm_2_scaffold_3315_18
unknown

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13496..14494
DNA (999bp) protein (333aa)

This feature has no annotations

13_1_40cm_2_scaffold_3315_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

14621..14935
DNA (315bp) protein (105aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_2_scaffold_3315_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15188..15964
DNA (777bp) protein (259aa)
Probable DNA repair protein Desca_1164 n=2 Tax=Desulfotomaculum RepID=F6B3J9_DESCC
DNA end-binding protein Ku; K10979 DNA end-binding protein Ku Tax=RBG_16_Euryarchaeota_68_12_curated
DNA repair protein
13_1_40cm_2_scaffold_3315_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15971..16963
DNA (993bp) protein (331aa)
DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Euryarchaeota_68_12_curated
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU rbh
DNA ligase
13_1_40cm_2_scaffold_3315_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16999..18756
DNA (1758bp) protein (586aa)
Pyrrolo-quinoline quinone n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KRT1_RHOSK
Pyrrolo-quinoline quinone
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_3315_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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18817..20949
DNA (2133bp) protein (711aa)
Methionine--tRNA ligase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TWX7_9EURY
methionyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_68_12_curated
methionyl-tRNA synthetase
13_1_40cm_2_scaffold_3315_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(20946..21350)
DNA (405bp) protein (135aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein; K07131 Tax=RBG_16_Euryarchaeota_68_13_curated
Roadblock/LC7 family protein
13_1_40cm_2_scaffold_3315_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

21443..22111
DNA (669bp) protein (223aa)
Putative metal-dependent phosphoesterase, PHP family n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNB7_ACIS0
putative metal-dependent phosphoesterase, PHP family Tax=RBG_16_Euryarchaeota_68_12_curated
putative metal-dependent phosphoesterase, PHP family
13_1_40cm_2_scaffold_3315_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(22108..22341)
DNA (234bp) protein (78aa)
Roadblock/LC7 family protein; K07131 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 26 items

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