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13_1_40cm_2_scaffold_88437

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_88437_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3..491
DNA (489bp) protein (163aa)
DNA repair helicase rad3; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] Tax=RBG_16_Euryarchaeota_67_27_curated
Putative helicase n=1 Tax=uncultured archaeon RepID=D1JIC7_9ARCH
DEAD/DEAH box helicase
13_1_40cm_2_scaffold_88437_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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615..1226
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E55C1
O-sialoglycoprotein endopeptidase Tax=RBG_16_Euryarchaeota_67_27_curated
O-sialoglycoprotein endopeptidase-related protein
13_1_40cm_2_scaffold_88437_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1235..1780
DNA (546bp) protein (182aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T8N9_9EURY
deoxyribonucleotide triphosphate pyrophosphatase
13_1_40cm_2_scaffold_88437_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1814..2836
DNA (1023bp) protein (341aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
galE-5; Nucleoside-diphosphate-sugar epimerase (EC:5.1.3.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D7D20
13_1_40cm_2_scaffold_88437_trna_1
unknown

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2719..2814
DNA (96bp)
transferRNA
13_1_40cm_2_scaffold_88437_5
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2870..4096)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M0Y0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB73822.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
13_1_40cm_2_scaffold_88437_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4245..4718
DNA (474bp) protein (158aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein Bm3-1_04649 id=4449776 bin=GWC2_Chloroflexi_73_18 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_2_scaffold_88437_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(4687..5406)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMX6_THEBM
hypothetical protein; K06927 Tax=RBG_16_Euryarchaeota_67_27_curated
Hypothetical protein
13_1_40cm_2_scaffold_88437_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5540..6178
DNA (639bp) protein (213aa)
Creatininase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IEI1_ACIB4
creatininase Tax=RBG_16_Euryarchaeota_68_12_curated
Creatininase
13_1_40cm_2_scaffold_88437_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6181..6873
DNA (693bp) protein (231aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=2 Tax=Bradyrhizobiaceae RepID=F7QLK3_9BRAD
13_1_40cm_2_scaffold_88437_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6857..7180)
DNA (324bp) protein (108aa)
Transcriptional regulator, TrmB n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5S4_9EURY
transcriptional regulator, TrmB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcriptional regulator, TrmB
13_1_40cm_2_scaffold_88437_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7366..7671
DNA (306bp) protein (102aa)
50S ribosomal protein L44e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQG8_ACIS0
rpl44e; 50S ribosomal protein L44e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein L44E
13_1_40cm_2_scaffold_88437_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7668..7838
DNA (171bp) protein (57aa)
30S ribosomal protein S27e n=3 Tax=Thermococcus RepID=RS27_THEON
rps27e; 30S ribosomal protein S27; K02978 small subunit ribosomal protein S27e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
30S ribosomal protein S27e
13_1_40cm_2_scaffold_88437_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7882..8604
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003618409 rbh
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
translation initiation factor 2, alpha subunit
13_1_40cm_2_scaffold_88437_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8608..8778
DNA (171bp) protein (57aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPM9_THELI
RNA-binding protein Nop10p Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosome biogenesis protein Nop10
Displaying 15 items

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