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13_1_40cm_3_scaffold_1159

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1159_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..501
DNA (501bp) protein (167aa)
Peptidase M16 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB52_9BACT
Peptidase M16 domain protein {ECO:0000313|EMBL:EEF62737.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
peptidase M16 domain-containing protein
13_1_40cm_3_scaffold_1159_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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604..1890
DNA (1287bp) protein (429aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
13_1_40cm_3_scaffold_1159_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1890..4364
DNA (2475bp) protein (825aa)
LmbE family protein n=1 Tax=Spirosoma luteum RepID=UPI000377DB95
LmbE family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
LmbE family protein
13_1_40cm_3_scaffold_1159_4
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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4354..5376
DNA (1023bp) protein (341aa)
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein n=1 Tax=Desmospora sp. 8437 RepID=F5SGB3_9BACL
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein {ECO:0000313|EMBL:EGK11085.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;
extracellular solute-binding protein
13_1_40cm_3_scaffold_1159_5
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5373..6344
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000381924B
spermidine/putrescine ABC transporter ATP-binding subunit; K11076 putrescine transport system ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
spermidine/putrescine ABC transporter ATP-binding subunit
13_1_40cm_3_scaffold_1159_6
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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6341..7972
DNA (1632bp) protein (544aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="
iron ABC transporter permease
13_1_40cm_3_scaffold_1159_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7969..9180
DNA (1212bp) protein (404aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multidrug resistance protein
13_1_40cm_3_scaffold_1159_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9200..10774
DNA (1575bp) protein (525aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1159_9
unknown

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10776..11159
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_3_scaffold_1159_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11306..13072
DNA (1767bp) protein (589aa)
integral membrane transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative integral membrane transport protein id=4722254 bin=GWC2_Deltaproteobacteria_66_88 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_1159_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(13069..14802)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I3_GEMAT
putative protein kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative protein kinase
13_1_40cm_3_scaffold_1159_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(15130..16188)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4V8_GEMAT
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
Protein of unknown function DUF457, transmembrane
13_1_40cm_3_scaffold_1159_13
unknown

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comp(16297..16569)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_1159_14
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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16922..17419
DNA (498bp) protein (166aa)
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_3_scaffold_1159_15
unknown

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17586..17918
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_3_scaffold_1159_16

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17915..18670
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89250.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_3_scaffold_1159_17
unknown

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18827..19234
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_3_scaffold_1159_18

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19238..21760
DNA (2523bp) protein (841aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89251.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_3_scaffold_1159_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(21744..22757)
DNA (1014bp) protein (338aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXH1_HERA2
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
multi-sensor hybrid histidine kinase
Displaying 19 items

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