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13_1_40cm_3_scaffold_134

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_134_1

Not on your lists

3..1541
DNA (1539bp) protein (513aa)
Fibronectin type III domain protein {ECO:0000313|EMBL:KKS92046.1}; TaxID=1618909 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_12.;"
Fibronectin, type III domain protein id=4667438 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
VCBS repeat-containing protein
13_1_40cm_3_scaffold_134_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1620..2882
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003153480
Uncharacterized protein {ECO:0000313|EMBL:ETK34325.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_40cm_3_scaffold_134_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2876..4480)
DNA (1605bp) protein (535aa)
Alpha/beta superfamily hydrolase n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DMI0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB15197.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasi
13_1_40cm_3_scaffold_134_4
unknown

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4658..4942
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_3_scaffold_134_5
unknown

Not on your lists

4939..5094
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_3_scaffold_134_6
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

5143..6144
DNA (1002bp) protein (334aa)
alcohol dehydrogenase; K12957 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-] Tax=GWB1_Bdellovibrionales_55_8_curated
Alcohol dehydrogenase GroES domain protein id=2546114 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good rbh
alcohol dehydrogenase zinc-binding domain protein
13_1_40cm_3_scaffold_134_7
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6134..7741)
DNA (1608bp) protein (536aa)
Acyl-CoA-ligase/synthetase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AGR3_BURGB rbh
acyl-CoA-ligase/synthetase
Acyl-CoA-ligase/synthetase {ECO:0000313|EMBL:ACR29020.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gl
13_1_40cm_3_scaffold_134_8
unknown

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comp(7749..8336)
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_3_scaffold_134_9
Xenorhabdus poinarii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8362..9396)
DNA (1035bp) protein (345aa)
protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDG22222.1}; TaxID=40577 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus poi
13_1_40cm_3_scaffold_134_10
Xenorhabdus poinarii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9418..10413)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Yersinia enterocolitica subsp. palearctica PhRBD_Ye1 RepID=G4KCA7_YEREN
protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDG22223.1}; TaxID=40577 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus poi
13_1_40cm_3_scaffold_134_11
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10605..11210
DNA (606bp) protein (202aa)
FMN-binding negative transcriptional regulator n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R808_PIRSD
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
FMN-binding negative transcriptional regulator
13_1_40cm_3_scaffold_134_12
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11242..12108
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0B5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY87861.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_1_40cm_3_scaffold_134_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12053..13075)
DNA (1023bp) protein (341aa)
Chemotaxis protein methyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0N5_9RHIZ
Chemotaxis protein methyltransferase {ECO:0000313|EMBL:ENN84692.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
13_1_40cm_3_scaffold_134_14
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13044..14360)
DNA (1317bp) protein (439aa)
UPI0003CE4E91 related cluster n=1 Tax=unknown RepID=UPI0003CE4E91
Membrane protein {ECO:0000313|EMBL:ESY88995.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC22
hypothetical protein
13_1_40cm_3_scaffold_134_15
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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14594..15634
DNA (1041bp) protein (347aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:GAN35356.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia
NAD-dependent epimerase/dehydratase id=3297375 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_134_16
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15681..16244
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase RmlC n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BNP6_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AJY68206.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobact
13_1_40cm_3_scaffold_134_17
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16252..17616
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BJ84_9GAMM
NAD(P)-dependent oxidoreductase {ECO:0000313|EMBL:AJY68205.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter su
putative homoserine dehydrogenase
13_1_40cm_3_scaffold_134_18
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

17613..18413
DNA (801bp) protein (267aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000376EBFD
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KIJ84455.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB
13_1_40cm_3_scaffold_134_19
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18416..19066
DNA (651bp) protein (217aa)
Putative LmbE-like protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EIV3_9CYAN
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:AJY68203.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
LmbE family protein
13_1_40cm_3_scaffold_134_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19066..20238
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000318C053 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ42489.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
13_1_40cm_3_scaffold_134_21
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20263..21369)
DNA (1107bp) protein (369aa)
FAD-dependent oxidoreductase n=1 Tax=Roseomonas sp. B5 RepID=UPI00036B858E
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH12634.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas ce
FAD dependent oxidoreductase
13_1_40cm_3_scaffold_134_22
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21424..22362)
DNA (939bp) protein (313aa)
Glycosyl transferase family 2 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4H2_DESAT rbh
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADH86447.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulf
13_1_40cm_3_scaffold_134_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22359..24293)
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372087D rbh
Asparagine synthetase {ECO:0000313|EMBL:AKF04696.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaraci
asparagine synthetase
Displaying 23 items

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