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13_1_40cm_3_scaffold_1179

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1179_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..97
DNA (96bp) protein (32aa)
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_3_scaffold_1179_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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94..1404
DNA (1311bp) protein (437aa)
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] id=14626083 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] Tax=CSP1_6_Rokubacteria
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_3_scaffold_1179_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1391..3004
DNA (1614bp) protein (538aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] id=14626084 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
13_1_40cm_3_scaffold_1179_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3148..4215
DNA (1068bp) protein (356aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase id=2475797 bin=GWC2_Methylomirabilis_70_16 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_1179_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4225..4647
DNA (423bp) protein (141aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine triad (HIT) protein id=4743717 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine triad (HIT) protein
13_1_40cm_3_scaffold_1179_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4647..5051
DNA (405bp) protein (135aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
B12-binding protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] id=14626086 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
isobutyryl-CoA mutase
13_1_40cm_3_scaffold_1179_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5055..6200
DNA (1146bp) protein (382aa)
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Isovaleryl-CoA dehydrogenase id=4743715 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_3_scaffold_1179_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6197..6979
DNA (783bp) protein (261aa)
ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JS70_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC35538.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
ABC transporter
13_1_40cm_3_scaffold_1179_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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6976..7722
DNA (747bp) protein (249aa)
ABC transporter, permease protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVJ6_9PROT
binding-protein-dependent transport system inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_3_scaffold_1179_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7710..8462
DNA (753bp) protein (251aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11K66_MESSB
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG62209.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
13_1_40cm_3_scaffold_1179_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8616..8819
DNA (204bp) protein (68aa)
id=4852965 Tax=GWC2_Rokubacteria_70_16_curated
id=4852965 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_1179_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(8844..9752)
DNA (909bp) protein (303aa)
Oligopeptide ABC transporter permease protein id=4192677 bin=GWF2_Methylomirabilis_70_14 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
gsiD; Oligopeptide ABC transporter permease protein; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
gsiD; Oligopeptide ABC transporter permease protein
13_1_40cm_3_scaffold_1179_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9718..10644)
DNA (927bp) protein (309aa)
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=4192678 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
13_1_40cm_3_scaffold_1179_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10690..12234)
DNA (1545bp) protein (515aa)
Oligopeptide ABC transpoter oligopeptide-binding protein id=4192679 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
oligopeptide ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_1179_15

Not on your lists

12555..12758
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW5_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_1179_16
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

12762..13223
DNA (462bp) protein (154aa)
CBS domain containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW6_THET1
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACZ42987.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_3_scaffold_1179_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13248..14513)
DNA (1266bp) protein (422aa)
id=14627806 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_3_scaffold_1179_18
unknown

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comp(14608..14841)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_3_scaffold_1179_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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15648..16469
DNA (822bp) protein (274aa)
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxyacyl-CoA dehydrogenase NAD-binding id=3880345 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_3_scaffold_1179_20
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16471..17226
DNA (756bp) protein (252aa)
Putative branched-chain amino acid transport system ATP-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALP0_AZOBR rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
amino acid ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_1179_21
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17219..17923
DNA (705bp) protein (235aa)
ABC transporter-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXM2_9RHIZ
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
ABC transporter
13_1_40cm_3_scaffold_1179_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17957..19168
DNA (1212bp) protein (404aa)
ABC transporter substrate-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ8_9BURK
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_1179_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19360..19896
DNA (537bp) protein (179aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ7_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
Displaying 23 items

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