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13_1_40cm_3_scaffold_1199

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1199_1
unknown

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comp(189..389)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_1199_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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938..3049
DNA (2112bp) protein (704aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
surface antigen; K07277 outer membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
outer membrane protein assembly complex, YaeT protein
13_1_40cm_3_scaffold_1199_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3073..3642
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E1_9BACT
outer membrane chaperone Skp (OmpH) family protein; K06142 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ompH; outer membrane protein
13_1_40cm_3_scaffold_1199_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3686..4732
DNA (1047bp) protein (349aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_40cm_3_scaffold_1199_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4725..6011
DNA (1287bp) protein (429aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyri
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT rbh
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
13_1_40cm_3_scaffold_1199_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6008..6775
DNA (768bp) protein (256aa)
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT rbh
13_1_40cm_3_scaffold_1199_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6772..7749
DNA (978bp) protein (326aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1199_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7746..8861
DNA (1116bp) protein (372aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_1_40cm_3_scaffold_1199_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8858..9484
DNA (627bp) protein (209aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Bacteria RepID=E7C459_9BACT
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_1_40cm_3_scaffold_1199_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9481..10521
DNA (1041bp) protein (347aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_1_40cm_3_scaffold_1199_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10547..11857
DNA (1311bp) protein (437aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLI2_CHLTF
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_3_scaffold_1199_12
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11857..12282
DNA (426bp) protein (142aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Thiocapsa marina 5811 RepID=F9U7H7_9GAMM
hypothetical protein
13_1_40cm_3_scaffold_1199_13
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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12410..12703
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FIE7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EKO38387.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
AMMECR1 domain protein
13_1_40cm_3_scaffold_1199_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12801..14183
DNA (1383bp) protein (461aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UCP012535
hypothetical protein id=24468235 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_3_scaffold_1199_15
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14197..16047
DNA (1851bp) protein (617aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHS9_9DELT
integral membrane protein MviN; K03980 virulence factor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
integral membrane protein MviN
13_1_40cm_3_scaffold_1199_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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16029..17840
DNA (1812bp) protein (604aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
uvrC; UvrABC system protein C
13_1_40cm_3_scaffold_1199_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17837..19015
DNA (1179bp) protein (393aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_3_scaffold_1199_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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19041..20225
DNA (1185bp) protein (395aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA id=5223158 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
UPF0272 protein
UPF0272 protein J421_3233 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1199_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20230..21858
DNA (1629bp) protein (543aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89857.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1199_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(21870..23309)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92913.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 20 items

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