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13_1_40cm_3_scaffold_1556

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1556_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19..2574)
DNA (2556bp) protein (852aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tmr:Tmar_1561 ATPase P (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=720233 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
copA; Cu(2+)-binding/translocating P-type ATPase (EC:3.6.3.4)
13_1_40cm_3_scaffold_1556_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2567..3016)
DNA (450bp) protein (150aa)
transporter, probably Ag+-ATPase (efflux) (EC:3.6.3.4) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Copper-translocating P-type ATPase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGT5_THEM7
copper-exporting ATPase
13_1_40cm_3_scaffold_1556_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3013..5004)
DNA (1992bp) protein (664aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CBCD2
potassium transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_3_scaffold_1556_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5532..6863)
DNA (1332bp) protein (444aa)
inositol-3-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Myo-inositol-1-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A962_GEMAT rbh
Myo-inositol-1-phosphate synthase
13_1_40cm_3_scaffold_1556_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6867..7553)
DNA (687bp) protein (229aa)
putative phosphatidylinositol synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative phosphatidylinositol synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A963_GEMAT
CDP-alcohol phosphatidyltransferase
13_1_40cm_3_scaffold_1556_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7614..8858)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Geobacillus thermodenitrificans (strain NG80-2) RepID=A4IMV6_GEOTN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_1556_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8937..10619
DNA (1683bp) protein (561aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
glycoside hydrolase family 3 domain protein
13_1_40cm_3_scaffold_1556_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10660..11820
DNA (1161bp) protein (387aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
Beta-lactamase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH34_RHOM4
beta-lactamase
13_1_40cm_3_scaffold_1556_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11892..12251
DNA (360bp) protein (120aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
erpA; putative iron-sulfur cluster insertion protein ErpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
iron-sulfur cluster assembly accessory protein
13_1_40cm_3_scaffold_1556_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12318..14645
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI000361A7C9
putative sodium/solute symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative sodium/solute symporter
13_1_40cm_3_scaffold_1556_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14638..16110)
DNA (1473bp) protein (491aa)
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amino acid permease-associated region id=3114221 bin=GWA2_Ignavibacteria_55_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
yfnA; putative amino acid permease
13_1_40cm_3_scaffold_1556_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16136..16765)
DNA (630bp) protein (210aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91151.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1556_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16973..17398)
DNA (426bp) protein (142aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_3_scaffold_1556_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17402..17872)
DNA (471bp) protein (157aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A974_GEMAT
putative biopolymer transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_3_scaffold_1556_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17853..18596)
DNA (744bp) protein (248aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_3_scaffold_1556_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18738..19415)
DNA (678bp) protein (226aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_40cm_3_scaffold_1556_17
unknown

Not on your lists

comp(19522..20262)
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_40cm_3_scaffold_1556_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(20271..21749)
DNA (1479bp) protein (493aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
two-component histidine kinase
13_1_40cm_3_scaffold_1556_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21751..22419)
DNA (669bp) protein (223aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_40cm_3_scaffold_1556_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22416..23972)
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_40cm_3_scaffold_1556_21
unknown

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comp(24045..25361)
DNA (1317bp) protein (439aa)

This feature has no annotations

13_1_40cm_3_scaffold_1556_22
unknown

Not on your lists

comp(25389..26105)
DNA (717bp) protein (239aa)

This feature has no annotations

13_1_40cm_3_scaffold_1556_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(27425..28267)
DNA (843bp) protein (281aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4522148 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
sugar ABC transporter permease
13_1_40cm_3_scaffold_1556_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28260..30113)
DNA (1854bp) protein (618aa)
sugar ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
binding-protein-dependent transporters inner membrane component
13_1_40cm_3_scaffold_1556_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(30110..30604)
DNA (495bp) protein (165aa)
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4214564 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_3_scaffold_1556_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(30568..31407)
DNA (840bp) protein (280aa)
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
extracellular solute-binding protein family 1
13_1_40cm_3_scaffold_1556_27
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31404..32129)
DNA (726bp) protein (242aa)
ABC transporter related protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSY5_PSEUU
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADV27141.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseu
13_1_40cm_3_scaffold_1556_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(32435..33259)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC02_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79506.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700
13_1_40cm_3_scaffold_1556_29

Not on your lists

comp(33262..33963)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UN60_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKM06684.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB family protein
13_1_40cm_3_scaffold_1556_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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33992..35404
DNA (1413bp) protein (471aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
regulator of chromosome condensation RCC1 Tax=GWC2_Gemmatimonadetes_71_10_curated
chromosome condensation regulator RCC1
Displaying items 1-30 of 39 in total

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