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13_1_40cm_3_scaffold_1798

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1798_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2760)
DNA (2760bp) protein (920aa)
methionine synthase, vitamin-B12 independent; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Gamma-glutamyltranspeptidase (EC:2.3.2.2)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000367B089
13_1_40cm_3_scaffold_1798_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2881..3459)
DNA (579bp) protein (193aa)
hypothetical protein id=14626154 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_40cm_3_scaffold_1798_3
unknown

Not on your lists

comp(3562..4014)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_3_scaffold_1798_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4011..5609)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJ06_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP66625.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
13_1_40cm_3_scaffold_1798_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5626..6378)
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2720981 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_1798_6
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

6708..8459
DNA (1752bp) protein (584aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TDE8_BURPP
PAS domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
sensory box protein
13_1_40cm_3_scaffold_1798_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8470..9519)
DNA (1050bp) protein (350aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X7E9_9PSEU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX06447.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_3_scaffold_1798_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9597..9887)
DNA (291bp) protein (97aa)
short-chain dehydrogenase/reductase SDR id=14627922 bin=bin7_NC10_sister species=Natronorubrum tibetense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR Tax=CSP1_6_Rokubacteria
Peroxisomal trans-2-enoyl-CoA reductase
13_1_40cm_3_scaffold_1798_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9896..10216)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003642595
NIPSNAP family containing protein {ECO:0000313|EMBL:ETW97806.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp.
NIPSNAP family containing protein
13_1_40cm_3_scaffold_1798_10
unknown

Not on your lists

comp(10426..10599)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_3_scaffold_1798_11
unknown

Not on your lists

comp(10830..10955)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_3_scaffold_1798_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11129..11572
DNA (444bp) protein (148aa)
methionine synthase II (cobalamin-independent)-like protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=GWA2_Rokubacteria_70_23_curated
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FTE3_9GAMM
methionine synthase II (cobalamin-independent)-like protein
13_1_40cm_3_scaffold_1798_13
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11649..12434)
DNA (786bp) protein (262aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCX4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KID27943.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
13_1_40cm_3_scaffold_1798_14

Not on your lists

12642..13532
DNA (891bp) protein (297aa)
Putative alpha/beta hydrolase fold n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1B2_9ZZZZ
Putative alpha/beta hydrolase fold {ECO:0000313|EMBL:ABZ06371.1}; TaxID=455515 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009G21.;"
epoxide hydrolase protein
13_1_40cm_3_scaffold_1798_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13545..14816
DNA (1272bp) protein (424aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
CinA-like protein id=4532703 bin=GWF2_Methylomirabilis_70_14 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence/damage-inducible protein CinA
13_1_40cm_3_scaffold_1798_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14875..15864
DNA (990bp) protein (330aa)
zinc-binding dehydrogenase family oxidoreductase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9J9_9BURK rbh
zinc-binding dehydrogenase oxidoreductase
13_1_40cm_3_scaffold_1798_17
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15964..16563)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B33A6A
CHRD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
CHRD domain-containing protein
13_1_40cm_3_scaffold_1798_18
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16787..17254
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C40E5
(2Fe-2S)-binding protein
(2Fe-2S)-binding protein {ECO:0000313|EMBL:AJP57620.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;
13_1_40cm_3_scaffold_1798_19
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17251..17628
DNA (378bp) protein (126aa)
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11H25_MESSB
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABG63300.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chela
13_1_40cm_3_scaffold_1798_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17610..19436
DNA (1827bp) protein (609aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7G8_9BURK
Isoquinoline 1-oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
oxidoreductase subunit protein
13_1_40cm_3_scaffold_1798_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19446..20831
DNA (1386bp) protein (462aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037155A5
hypothetical protein
13_1_40cm_3_scaffold_1798_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21392..21676
DNA (285bp) protein (95aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein id=4734636 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase
13_1_40cm_3_scaffold_1798_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21697..22242
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97819.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
Putative uncharacterized protein id=4935489 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_3_scaffold_1798_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22289..23476
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036217C3
CoA-transferase {ECO:0000313|EMBL:ETR76211.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_1_40cm_3_scaffold_1798_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23503..24078)
DNA (576bp) protein (192aa)
Putative uncharacterized protein id=4219817 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_3_scaffold_1798_26
unknown

Not on your lists

24104..24949
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_3_scaffold_1798_27
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24916..25578
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TF75_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05113.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
13_1_40cm_3_scaffold_1798_28
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

25601..25816
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEA5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW13534.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
hypothetical protein
Displaying 28 items

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