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13_1_40cm_3_scaffold_1773

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1773_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..736)
DNA (735bp) protein (245aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L0_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_1773_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(733..2511)
DNA (1779bp) protein (593aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K9_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_1773_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2508..3449)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_1_40cm_3_scaffold_1773_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3446..4420)
DNA (975bp) protein (325aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K6_GEMAT
ATPase associated with various cellular activities AAA_3
13_1_40cm_3_scaffold_1773_5
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4417..6024)
DNA (1608bp) protein (536aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G099_MICAE
PBS lyase HEAT domain-containing protein Tax=RBG_16_Desulfobacca_58_9_curated
PBS lyase HEAT domain-containing protein repeat-containing protein
13_1_40cm_3_scaffold_1773_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6027..6278)
DNA (252bp) protein (84aa)
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8D6_9CLOT
pseudouridine synthase Rsu
13_1_40cm_3_scaffold_1773_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6275..6688)
DNA (414bp) protein (138aa)
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pseudouridine synthase n=1 Tax=uncultured Thermus/Deinococcus group bacterium RepID=H5SNE1_9DEIN
pseudouridine synthase Rsu
13_1_40cm_3_scaffold_1773_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6685..7233)
DNA (549bp) protein (183aa)
Segregation and condensation protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K4_GEMAT
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scpB; segregation and condensation protein B
13_1_40cm_3_scaffold_1773_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7208..7936)
DNA (729bp) protein (243aa)
Segregation and condensation protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K3_GEMAT
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Gemmatimonadetes_66_8_curated
scpA; segregation and condensation protein A
13_1_40cm_3_scaffold_1773_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7945..8583)
DNA (639bp) protein (213aa)
Peptidase M50B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K2_GEMAT
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AHG90683.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1773_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


8707..8976
DNA (270bp) protein (90aa)
30S ribosomal protein S20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS20_GEMAT
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsT; 30S ribosomal protein S20
13_1_40cm_3_scaffold_1773_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8977..9723)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_1773_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9716..10354)
DNA (639bp) protein (213aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Class II aldolase/adducin family protein n=2 Tax=Chloroflexus RepID=A9WES5_CHLAA
class II aldolase/adducin family protein
13_1_40cm_3_scaffold_1773_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10351..11658)
DNA (1308bp) protein (436aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Dihydroorotase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J8_GEMAT
dihydroorotase multifunctional complex type
13_1_40cm_3_scaffold_1773_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11655..12620)
DNA (966bp) protein (322aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aspartate carbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PYRB_GEMAT
Aspartate carbamoyltransferase
13_1_40cm_3_scaffold_1773_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12617..13165)
DNA (549bp) protein (183aa)
pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_1
Bifunctional protein PyrR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J6_GEMAT
Bifunctional protein pyrR
13_1_40cm_3_scaffold_1773_17
unknown

Not on your lists

comp(13181..14170)
DNA (990bp) protein (330aa)

This feature has no annotations

13_1_40cm_3_scaffold_1773_18

Not on your lists

comp(14510..15433)
DNA (924bp) protein (308aa)
glyoxylate reductase (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=uncultured prokaryote RepID=H5SKV3_9ZZZZ
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:BAL56789.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
13_1_40cm_3_scaffold_1773_19
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(15442..16332)
DNA (891bp) protein (297aa)
citrate (Si)-synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBD2_THET1
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_3_scaffold_1773_20
unknown

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16376..16549
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_3_scaffold_1773_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16513..17919)
DNA (1407bp) protein (469aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW5_SOLUE
Peptidase M20 {ECO:0000313|EMBL:EYF06850.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apicu
hypothetical protein
13_1_40cm_3_scaffold_1773_22
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

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comp(17916..18386)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG64_ANADE id=5224350 bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_Chloroflexi_47_49_curated
hypothetical protein
13_1_40cm_3_scaffold_1773_23
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(18400..19359)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PEI1_9ZZZZ
NHL repeat containing protein Tax=RBG_16_Acidobacteria_64_8_curated
13_1_40cm_3_scaffold_1773_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(19389..20174)
DNA (786bp) protein (262aa)
lipoprotein NlpI, contains TPR repeats Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein id=8267249 bin=CD_OP8_4m species=Gracilimonas tropica genus=Gracilimonas taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tetratricopeptide TPR_2 repeat-containing protein
13_1_40cm_3_scaffold_1773_25
unknown

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20234..20392
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_3_scaffold_1773_trna_1
unknown

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comp(20310..20392)
DNA (83bp)
transferRNA
Displaying 26 items

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