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13_1_40cm_3_scaffold_2117

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2117_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..501)
DNA (501bp) protein (167aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
S-adenosylmethionine synthase
13_1_40cm_3_scaffold_2117_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(513..2288)
DNA (1776bp) protein (592aa)
ptsI; phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT
13_1_40cm_3_scaffold_2117_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2285..2611)
DNA (327bp) protein (109aa)
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein id=7200581 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ptsH; phosphocarrier protein HPr
13_1_40cm_3_scaffold_2117_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2602..3342)
DNA (741bp) protein (247aa)
Phosphotransferase system enzyme IID component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G3_GEMAT
phosphotransferase system enzyme IID component; K02796 PTS system, mannose-specific IID component Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PTS system mannose/fructose/sorbose family IID component
13_1_40cm_3_scaffold_2117_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3339..4016)
DNA (678bp) protein (226aa)
Putative phosphotransferase system enzyme IIC component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G2_GEMAT
phosphotransferase system PTS sorbose-specific IIC subunit
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:AHG90661.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2117_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4013..4486)
DNA (474bp) protein (158aa)
Phosphotransferase system enzyme IIB component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G1_GEMAT
phosphotransferase system enzyme IIB component Tax=GWC2_Gemmatimonadetes_71_10_curated
phosphotransferase system enzyme IIB component
13_1_40cm_3_scaffold_2117_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4483..4863)
DNA (381bp) protein (127aa)
phosphotransferase system enzyme IIA component; K02744 PTS system, N-acetylgalactosamine-specific IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G0_GEMAT
phosphotransferase system enzyme IIA component
13_1_40cm_3_scaffold_2117_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4856..5824)
DNA (969bp) protein (323aa)
hprK; HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HPr kinase/phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F9_GEMAT
hprK; HPr kinase/phosphorylase
13_1_40cm_3_scaffold_2117_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5821..6129)
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_2117_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6132..7253)
DNA (1122bp) protein (374aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F8_GEMAT
glycosyl transferase group 1
13_1_40cm_3_scaffold_2117_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7250..7663)
DNA (414bp) protein (138aa)
N utilization substance protein B homolog n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUSB_SOLUE
nusB; antitermination protein NusB; K03625 N utilization substance protein B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N utilization substance protein B-like protein
13_1_40cm_3_scaffold_2117_12
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7644..8129)
DNA (486bp) protein (162aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Desmospora sp. 8437 RepID=F5SBA0_9BACL
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
13_1_40cm_3_scaffold_2117_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8132..9337)
DNA (1206bp) protein (402aa)
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II (EC:3.5.4.25 4.1.99.12); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F5_GEMAT
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_40cm_3_scaffold_2117_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9319..9927)
DNA (609bp) protein (203aa)
ribE; riboflavin synthase alpha chain (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Riboflavin synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F4_GEMAT
Lumazine-binding domain protein
13_1_40cm_3_scaffold_2117_15
unknown

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10074..10427
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_3_scaffold_2117_16
unknown

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comp(11089..11865)
DNA (777bp) protein (259aa)
hypothetical protein
13_1_40cm_3_scaffold_2117_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11875..12900)
DNA (1026bp) protein (342aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F1_GEMAT
phosphoribosylformylglycinamidine cyclo-ligase
13_1_40cm_3_scaffold_2117_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12897..13817)
DNA (921bp) protein (307aa)
PfkB family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F0_GEMAT rbh
PfkB family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
PfkB domain protein
13_1_40cm_3_scaffold_2117_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13821..15413)
DNA (1593bp) protein (531aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=GWC2_Gemmatimonadetes_71_10_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E9_GEMAT
13_1_40cm_3_scaffold_2117_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15410..15715)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003605F6C
type I antifreeze protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
regulatory protein, FmdB family
13_1_40cm_3_scaffold_2117_21
unknown

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comp(15832..16176)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_3_scaffold_2117_22
unknown

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comp(16180..16854)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_3_scaffold_2117_23
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16865..17167)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S3V8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK90356.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_40cm_3_scaffold_2117_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(17237..17731)
DNA (495bp) protein (165aa)
Sodium/hydrogen exchanger n=2 Tax=Desulfovibrio vulgaris RepID=E3IJY4_DESVR
Kef-type potassium/proton antiporter, CPA2 family (TC 2.A.37.1) {ECO:0000313|EMBL:CDM66873.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrino
sodium/hydrogen exchanger
Displaying 24 items

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