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13_1_40cm_3_scaffold_2018

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2018_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..288)
DNA (288bp) protein (96aa)
Lysine 2,3-aminomutase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PN65_9DELT
Lysine 2,3-aminomutase {ECO:0000313|EMBL:EPX64461.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
L-lysine 2,3-aminomutase
13_1_40cm_3_scaffold_2018_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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568..1383
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40519.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_2018_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1410..2162
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40520.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2018_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2185..2811
DNA (627bp) protein (209aa)
LemA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRH9_KORVE
hypothetical protein
LemA {ECO:0000313|EMBL:ABF40521.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_1_40cm_3_scaffold_2018_5
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(2831..3322)
DNA (492bp) protein (164aa)
carbohydrate kinase (EC:2.7.1.12)
Carbohydrate kinase HrmK, thermoresistant glucokinase family {ECO:0000313|EMBL:ACC83650.1}; EC=2.7.1.12 {ECO:0000313|EMBL:ACC83650.1};; Putative hexuronic acid kinase HrmK {ECO:0000313|EMBL:AAF77059.1
Carbohydrate kinase HrmK, thermoresistant glucokinase family n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=Q9KHA3_NOSP7
13_1_40cm_3_scaffold_2018_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3341..4231)
DNA (891bp) protein (297aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URY5_ROSS1
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABQ89388.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseifle
13_1_40cm_3_scaffold_2018_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(4433..5926)
DNA (1494bp) protein (498aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RIFCSPLOWO2_12_FULL_Acidobact
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFK4_9BACT
methylmalonate-semialdehyde dehydrogenase
13_1_40cm_3_scaffold_2018_8
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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6180..6515
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379AC72
hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
putative conserved protein
13_1_40cm_3_scaffold_2018_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(6557..6928)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILD9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF92061.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
13_1_40cm_3_scaffold_2018_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(6925..7188)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRV8_9DELT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_2018_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(7246..7794)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUW5_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_2018_12

Not on your lists

comp(7886..8869)
DNA (984bp) protein (328aa)
Glucokinase (Glucose kinase) {ECO:0000313|EMBL:CBH99837.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CBH99837.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000345A134
glucokinase
13_1_40cm_3_scaffold_2018_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8919..10442)
DNA (1524bp) protein (508aa)
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=14625649 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=CSP1_6_Rokubacteria
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
13_1_40cm_3_scaffold_2018_14
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10499..11110)
DNA (612bp) protein (204aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q886_9DELT
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EHJ48100.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibri
haloacid dehalogenase
13_1_40cm_3_scaffold_2018_15
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(11186..12925)
DNA (1740bp) protein (580aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bac
Bifunctional transaldolase / phosphoglucose isomerase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG43_9BACT
transaldolase
13_1_40cm_3_scaffold_2018_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13125..13457
DNA (333bp) protein (111aa)
Probable Fe(2+)-trafficking protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JS74_9GAMM
Fe(II) trafficking protein YggX Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
13_1_40cm_3_scaffold_2018_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(13458..14714)
DNA (1257bp) protein (419aa)
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BT0_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ATP-dependent carboxylate-amine ligase domain-containing protein
13_1_40cm_3_scaffold_2018_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14741..16195)
DNA (1455bp) protein (485aa)
radical SAM domain-containing protein id=14429538 bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
radical SAM domain-containing protein Tax=CSP1_5_NC10
radical SAM domain-containing protein
13_1_40cm_3_scaffold_2018_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16281..18947
DNA (2667bp) protein (889aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] id=12557817 bin=CNBR_ACIDO species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
aconitase (EC:4.2.1.3)
13_1_40cm_3_scaffold_2018_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

18993..20294
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037DB1A4
Xaa-Pro dipeptidase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
amidohydrolase
13_1_40cm_3_scaffold_2018_21
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20310..21128)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003793AA2
prolipoprotein diacylglyceryl transferase
Putative prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ACO33104.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobac
13_1_40cm_3_scaffold_2018_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(21189..22505)
DNA (1317bp) protein (439aa)
rocC; amino acid permease rocC Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid permease id=24444110 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
amino acid transporter
13_1_40cm_3_scaffold_2018_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(22506..23456)
DNA (951bp) protein (317aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] id=14627707 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=CSP1_6_Rokubacteria
agmatinase
13_1_40cm_3_scaffold_2018_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

23878..25182
DNA (1305bp) protein (435aa)
Outer membrane protein assembly complex, YaeT protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ35_CHLTF
outer membrane protein assembly complex, YaeT protein
Outer membrane protein assembly complex, YaeT protein {ECO:0000313|EMBL:AEP12803.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloraci
Displaying 24 items

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