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13_1_40cm_3_scaffold_2105

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2105_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

1..489
DNA (489bp) protein (163aa)
glyoxalase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036BA6B8
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_RIF_CHLX_69_14_curated
lyase
13_1_40cm_3_scaffold_2105_2
unknown

Not on your lists

578..925
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_3
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2475..3206)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5ADFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL47655.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
13_1_40cm_3_scaffold_2105_4
unknown

Not on your lists

3451..3669
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_5
unknown

Not on your lists

comp(5006..5314)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5452..5883
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003773D2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24077.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
13_1_40cm_3_scaffold_2105_7
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5959..6879)
DNA (921bp) protein (307aa)
molecular chaperone GroEL n=1 Tax=Desulfitobacterium hafniense RepID=UPI00006DEEC7
groEL; chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=138119 species="Bacteria; Firmicutes; Clost
13_1_40cm_3_scaffold_2105_8
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6821..7531)
DNA (711bp) protein (237aa)
60 kDa chaperonin n=2 Tax=Megasphaera RepID=S7HN81_9FIRM
molecular chaperone GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1263087 spec
13_1_40cm_3_scaffold_2105_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7553..7813)
DNA (261bp) protein (87aa)
10 kDa chaperonin n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5V3_DESAS
groS; chaperonin, 10 kDa; K04078 chaperonin GroES Tax=RBG_16_RIF_CHLX_70_13_curated
chaperonin Cpn10
13_1_40cm_3_scaffold_2105_10
unknown

Not on your lists

comp(7867..8130)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8375..8932
DNA (558bp) protein (186aa)
phoB; PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
13_1_40cm_3_scaffold_2105_12
unknown

Not on your lists

9019..9339
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9796..10272)
DNA (477bp) protein (159aa)
Heat shock protein Hsp20 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI33_RHOMR
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEN73791.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
hspA_[H]; heat shock protein, Hsp20 family
13_1_40cm_3_scaffold_2105_14
unknown

Not on your lists

10450..10692
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_trna_1
unknown

Not on your lists

comp(10631..10703)
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_2105_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10720..10956)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00036486F4
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY29427.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
Cro/Cl family transcriptional regulator
13_1_40cm_3_scaffold_2105_16
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10953..11465)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Acinetobacter guillouiae RepID=N8S559_ACIGI
Uncharacterized protein {ECO:0000313|EMBL:ENU58380.1}; TaxID=1217655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guil
hypothetical protein
13_1_40cm_3_scaffold_2105_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11573..11956
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036D1C1C
Uncharacterized protein {ECO:0000313|EMBL:KJL35163.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
13_1_40cm_3_scaffold_2105_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11964..12485)
DNA (522bp) protein (174aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FPI3_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO73178.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
13_1_40cm_3_scaffold_2105_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12580..12993)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA87_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40146.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_2105_20
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(13237..13986)
DNA (750bp) protein (250aa)
LmbE family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU34_9CHLR
LmbE family protein Tax=RBG_13_Chloroflexi_68_17_curated
LmbE family protein
13_1_40cm_3_scaffold_2105_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13988..14644)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7P3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETK37242.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
13_1_40cm_3_scaffold_2105_22
unknown

Not on your lists

14723..15163
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_3_scaffold_2105_23
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15259..15882
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00038298DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS15314.1}; TaxID=1232724 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
13_1_40cm_3_scaffold_2105_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

15934..16311
DNA (378bp) protein (126aa)
esterase n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029A89F0
esterase Tax=RBG_16_RIF_CHLX_72_14_curated
esterase
Displaying 25 items

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