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13_1_40cm_3_scaffold_1917

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1917_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..660)
DNA (660bp) protein (220aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S3U7_GEOOG
aldehyde oxidase/xanthine dehydrogenase protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADB72975.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geoder
13_1_40cm_3_scaffold_1917_2
unknown

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848..1792
DNA (945bp) protein (315aa)

This feature has no annotations

13_1_40cm_3_scaffold_1917_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1741..2193)
DNA (453bp) protein (151aa)
Putative carbon monoxide dehydrogenase, small chain CutC n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3U3_STRRD
carbon monoxide dehydrogenase, small chain CutC
Putative carbon monoxide dehydrogenase, small chain CutC {ECO:0000313|EMBL:ACZ89378.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;"
13_1_40cm_3_scaffold_1917_4
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2190..2885)
DNA (696bp) protein (232aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Molybdopterin dehydrogenase FAD-binding protein id=2145514 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_3_scaffold_1917_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(2939..3718)
DNA (780bp) protein (260aa)
Putative polyketide cyclase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN4_THERP
putative polyketide cyclase
Putative polyketide cyclase {ECO:0000313|EMBL:ACM05305.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain
13_1_40cm_3_scaffold_1917_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3715..5202)
DNA (1488bp) protein (496aa)
AMP-dependent synthetase and ligase n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FGW8_SACEN
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CAM03293.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora
13_1_40cm_3_scaffold_1917_7
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5212..5592)
DNA (381bp) protein (127aa)
CBS domain containing protein n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ACD8_IGNH4
oxidoreductase
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP05283.1}; TaxID=477245 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strep
13_1_40cm_3_scaffold_1917_8
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5593..6279)
DNA (687bp) protein (229aa)
Polyphosphate kinase 2 n=1 Tax=Frankia sp. CN3 RepID=G6H9B6_9ACTO
hypothetical protein
Polyphosphate kinase 2, PA0141 family {ECO:0000313|EMBL:KJE25023.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
13_1_40cm_3_scaffold_1917_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6384..7697)
DNA (1314bp) protein (438aa)
pyrimidine permease n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A7029
Xanthine/uracil permeases {ECO:0000313|EMBL:GAD22687.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
rutG; putative pyrimidine permease RutG
13_1_40cm_3_scaffold_1917_10
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7792..8109)
DNA (318bp) protein (106aa)
PAS domain S-box n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GI61_9DELT
two-component hybrid sensor and regulator
PAS domain S-box {ECO:0000313|EMBL:EKO40794.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio ma
13_1_40cm_3_scaffold_1917_11

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comp(8213..9448)
DNA (1236bp) protein (412aa)
DEAD/DEAH box helicase-like protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D237_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKM18484.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DEAD/DEAH box helicase
13_1_40cm_3_scaffold_1917_12
unknown

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comp(9561..9767)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_3_scaffold_1917_13
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

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10536..12317
DNA (1782bp) protein (594aa)
Two-component sensor kinase id=3364944 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
two-component hybrid sensor and regulator Tax=RBG_16_Planctomycetes_41_13_curated
Signal transduction histidine kinase
13_1_40cm_3_scaffold_1917_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

12502..13794
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6Z9_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH80760.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter
major facilitator superfamily protein
13_1_40cm_3_scaffold_1917_15
GWC2_CPR2_39_35, CPR2, Bacteria

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comp(13791..14675)
DNA (885bp) protein (295aa)
CHAP domain containing protein id=2900418 bin=GWC2_CPR2_39_35 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
CHAP domain containing protein Tax=GWC2_CPR2_39_35
secretory antigen SsaA-like protein
13_1_40cm_3_scaffold_1917_16
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15072..15809)
DNA (738bp) protein (246aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKP95307.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
13_1_40cm_3_scaffold_1917_17
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15806..17419)
DNA (1614bp) protein (538aa)
Gamma-glutamyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FC45_9RHIZ
Gamma-glutamyltransferase {ECO:0000313|EMBL:ESX64151.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
acylase
13_1_40cm_3_scaffold_1917_18
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(17432..17752)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002F8D548
transcriptional regulator Tax=RBG_13_RIF03_48_7_curated
hypothetical protein
13_1_40cm_3_scaffold_1917_19
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

17873..18433
DNA (561bp) protein (187aa)
TadE family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG84_THET1
TadE family protein
TadE family protein {ECO:0000313|EMBL:ACZ41940.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_3_scaffold_1917_20
unknown

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18433..19059
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_40cm_3_scaffold_1917_21
unknown

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19064..20437
DNA (1374bp) protein (458aa)

This feature has no annotations

Displaying 21 items

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