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13_1_40cm_3_scaffold_2726

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2726_1
unknown

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1..288
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_3_scaffold_2726_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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387..1643
DNA (1257bp) protein (419aa)
Toxic anion resistance family protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B4N9_FRADG rbh
toxic anion resistance family protein
Toxic anion resistance family protein {ECO:0000313|EMBL:AEH09091.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomera
13_1_40cm_3_scaffold_2726_3
unknown

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1695..1826
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_3_scaffold_2726_4
unknown

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1823..2419
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_3_scaffold_2726_5
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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2460..4163
DNA (1704bp) protein (568aa)
FAD-binding dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037561DF rbh
FAD-binding dehydrogenase
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ABX04368.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae;
13_1_40cm_3_scaffold_2726_6

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4185..4490
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM17305.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14631804 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
13_1_40cm_3_scaffold_2726_7
unknown

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4509..4928
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_3_scaffold_2726_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4950..6365)
DNA (1416bp) protein (472aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidete
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIH7_RHOM4
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
13_1_40cm_3_scaffold_2726_9

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comp(6375..7355)
DNA (981bp) protein (327aa)
Transketolase central region n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDK7_THET1
Marine sediment metagenome DNA, contig: S01H4_L00282 {ECO:0000313|EMBL:GAG56708.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transketolase
13_1_40cm_3_scaffold_2726_10
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(7355..8371)
DNA (1017bp) protein (339aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum t
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDK6_THET1 rbh
13_1_40cm_3_scaffold_2726_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8735..9487)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036BB67C
peptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACU70107.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Cate
13_1_40cm_3_scaffold_2726_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9471..10442)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036EBE47 rbh
peptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACU70106.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Cate
13_1_40cm_3_scaffold_2726_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10439..11194)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000363983E
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU70105.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;
13_1_40cm_3_scaffold_2726_14
unknown

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11528..11647
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_3_scaffold_2726_15
unknown

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11669..11872
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_2726_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12329..13996)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037A19EB rbh
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACU70103.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" so
13_1_40cm_3_scaffold_2726_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(14031..15254)
DNA (1224bp) protein (408aa)
ROK family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP13_9CHLR
ROK family protein {ECO:0000313|EMBL:EFH85549.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer
ROK family protein
13_1_40cm_3_scaffold_2726_18
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(15363..16643)
DNA (1281bp) protein (427aa)
Glycoside hydrolase family 4 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2W8_KRIFD
glycoside hydrolase family 4
Glycoside hydrolase family 4 {ECO:0000313|EMBL:ADB30299.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 178
13_1_40cm_3_scaffold_2726_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16730..17764
DNA (1035bp) protein (345aa)
ATPase n=1 Tax=Saccharopolyspora erythraea D RepID=T2RU68_SACER
BadF/BadG/BcrA/BcrD type ATPase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
kinase
13_1_40cm_3_scaffold_2726_20
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18280..19416
DNA (1137bp) protein (379aa)
Beta-lactamase n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MT83_9ACTO
Beta-lactamase {ECO:0000313|EMBL:EIF87980.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
Beta-lactamase class C and other penicillin binding protein
13_1_40cm_3_scaffold_2726_21
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19421..19831)
DNA (411bp) protein (137aa)
hypothetical protein; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RBG_13_Deltaproteobacteria_65_10_curated
queF; 7-cyano-7-deazaguanine reductase (EC:1.7.1.-)
NADPH-dependent 7-cyano-7-deazaguanine reductase id=2431434 bin=GWC2_Deltaproteobacteria_55_46 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
13_1_40cm_3_scaffold_2726_22
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19847..19990)
DNA (144bp) protein (48aa)
Conserved hypothetical integral membrane protein n=1 Tax=beta proteobacterium CB RepID=M1T3F1_9PROT
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:AGG33537.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
Displaying 22 items

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