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13_1_40cm_3_scaffold_2788

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2788_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2..244
DNA (243bp) protein (81aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY4_9BACT
13_1_40cm_3_scaffold_2788_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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241..834
DNA (594bp) protein (198aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY5_9BACT
13_1_40cm_3_scaffold_2788_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

837..1454
DNA (618bp) protein (206aa)
hisH; imidazole glycerol phosphate synthase glutamine amidotransferase subunit (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisH; imidazole glycerol phosphate synthase glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH id=1872344 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_3_scaffold_2788_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1451..2128
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY7_9BACT
hypothetical protein
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_40cm_3_scaffold_2788_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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2125..2844
DNA (720bp) protein (240aa)
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RBG_19FT_C
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY8_9BACT
13_1_40cm_3_scaffold_2788_6
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

2857..3642
DNA (786bp) protein (262aa)
hisF; imidazoleglycerol phosphate synthase cyclase subunit; K02500 cyclase [EC:4.1.3.-] Tax=RBG_16_Nitrospirae_43_11_curated
hisF; imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY9_9BACT rbh
13_1_40cm_3_scaffold_2788_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

3653..4339
DNA (687bp) protein (229aa)
hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase (EC:3.5.4.19 3.6.1.31); K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6
hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ0_9BACT
13_1_40cm_3_scaffold_2788_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4343..4681
DNA (339bp) protein (113aa)
Purine nucleoside phosphoramidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ1_9BACT
hinT; purine nucleoside phosphoramidase
Purine nucleoside phosphoramidase {ECO:0000313|EMBL:CBK40750.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_2788_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4764..6641
DNA (1878bp) protein (626aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ2_9BACT rbh
13_1_40cm_3_scaffold_2788_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6628..8433
DNA (1806bp) protein (602aa)
RNA polymerase sigma factor SigA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ3_9BACT
rpoD; RNA polymerase sigma factor RpoD (Sigma-70); K03086 RNA polymerase primary sigma factor Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
rpoD; RNA polymerase sigma factor RpoD (Sigma-70)
13_1_40cm_3_scaffold_2788_trna_1
unknown

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8439..8519
DNA (81bp)
transferRNA
13_1_40cm_3_scaffold_2788_11
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

8542..8934
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ4_9BACT
hypothetical protein; K07164 Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
hypothetical protein
Displaying 12 items

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