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13_1_40cm_3_scaffold_3246

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3246_1
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(1..237)
DNA (237bp) protein (79aa)
50S ribosomal protein L18e n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MCQ3_CALMQ
50S ribosomal protein L15
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilinge
13_1_40cm_3_scaffold_3246_2
CG_OP9-01, Atribacteria, Bacteria

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comp(341..1696)
DNA (1356bp) protein (452aa)
pyruvate kinase., pyruvate, water dikinase; K00873 pyruvate kinase [EC:2.7.1.40] Tax=CG_OP9-01
Pyruvate kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D051_PELTS
PykF; pyruvate kinase
13_1_40cm_3_scaffold_3246_3
unknown

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comp(1986..2204)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_3_scaffold_3246_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3112..3627
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ57_NITGG
hypothetical protein withCobQ/CobB/MinD/ParA nucleotide binding domain
Uncharacterized protein {ECO:0000313|EMBL:AFU59138.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_3246_5
RBG_16_Archaea_50_20_curated, Archaea

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3889..5079
DNA (1191bp) protein (397aa)
Transcriptional regulator n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8Y9_9ARCH
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_3246_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(5136..6329)
DNA (1194bp) protein (398aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_3246_7
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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6585..6866
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:ADB58804.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (
13_1_40cm_3_scaffold_3246_8
unknown

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6863..7018
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_3_scaffold_3246_9
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(7034..8287)
DNA (1254bp) protein (418aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=SYD_METKA rbh
aspartyl-tRNA synthetase Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_3_scaffold_3246_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(8366..9313)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q979E8_THEVO
transposase, IS605 OrfB family Tax=RBG_16_Thaumarchaeota_49_8_curated
transposase
13_1_40cm_3_scaffold_3246_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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9769..10971
DNA (1203bp) protein (401aa)
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_16_Armatimonadetes_67_12_curated
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] id=14632100 bin=bin9_gal15 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin9_gal15 organism_group=GAL15
phosphoglycerate mutase
13_1_40cm_3_scaffold_3246_12
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

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comp(10982..11875)
DNA (894bp) protein (298aa)
uncharacterized membrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
Putative uncharacterized protein id=4385671 bin=GWA2_OP3_53_43 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
uncharacterized membrane protein
13_1_40cm_3_scaffold_3246_13

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12300..13211
DNA (912bp) protein (304aa)
Zinc/iron permease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLY6_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:AKA49167.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
zinc/iron permease
13_1_40cm_3_scaffold_3246_14
unknown

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comp(13350..13715)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_3_scaffold_3246_15
unknown

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comp(13734..14237)
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_3_scaffold_3246_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14438..15109)
DNA (672bp) protein (224aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000373B16B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01308.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
13_1_40cm_3_scaffold_3246_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(15255..15452)
DNA (198bp) protein (66aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_3246_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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15888..16475
DNA (588bp) protein (196aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:AEU35519.1}; EC=3.2.2.20 {ECO:0000313|EMBL:AEU35519.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granuli
DNA-3-methyladenine glycosylase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3E887
DNA-3-methyladenine glycosylase I
13_1_40cm_3_scaffold_3246_19
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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16687..17067
DNA (381bp) protein (127aa)
UspA domain protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7Y3_9ARCH
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:BAJ48402.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum
13_1_40cm_3_scaffold_3246_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17078..17401
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B558_9ARCH
cbs_3; signal transduction protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
Displaying 20 items

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