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13_1_40cm_3_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_329_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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29..1135
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8P6_9ARCH
NurA domain-containing protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_329_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1138..2565
DNA (1428bp) protein (476aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DUF87 domain-containing protein id=2756267 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative ATPase
13_1_40cm_3_scaffold_329_3
unknown

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2821..3024
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_4
unknown

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3064..3648
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

3936..4787
DNA (852bp) protein (284aa)
Marine sediment metagenome DNA, contig: S06H3_C02025 Tax=RBG_16_Chloroflexi_68_14_curated
13_1_40cm_3_scaffold_329_6
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(5307..5810)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKH1_NITGG
Ig family protein Tax=RBG_16_Chloroflexi_48_8_curated
putative cell surface uncharacterized protein related to type IV pili
13_1_40cm_3_scaffold_329_7
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5940..6659)
DNA (720bp) protein (240aa)
Pheromone shutdown protein n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=Q8U181_PYRFU
hypothetical protein
Pheromone shutdown protein (TraB) {ECO:0000313|EMBL:CCE70515.1}; Signaling protein {ECO:0000313|EMBL:CAB50013.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococca
13_1_40cm_3_scaffold_329_8
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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6728..7495
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ABT4_IGNH4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU82386.1}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospitalis (s
13_1_40cm_3_scaffold_329_9
RBG_16_Archaea_50_20_curated, Archaea

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7492..8295
DNA (804bp) protein (268aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9Y4_METSL
13_1_40cm_3_scaffold_329_10
RBG_16_Archaea_50_20_curated, Archaea

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8292..9074
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_16_Archaea_50_20_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=3 Tax=unclassified Crenarchaeota RepID=UPI00038014D5
13_1_40cm_3_scaffold_329_11
RBG_16_Archaea_50_20_curated, Archaea

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9153..12692
DNA (3540bp) protein (1180aa)
Chromosome segregation ATPase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation protein smc1; K03529 chromosome segregation protein Tax=RBG_16_Archaea_50_20_curated
chromosome segregation ATPase
13_1_40cm_3_scaffold_329_12
RBG_16_Archaea_50_20_curated, Archaea

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12734..13366
DNA (633bp) protein (211aa)
Condensin subunit ScpA n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH0_9ARCH
segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Archaea_50_20_curated
segregation and condensation protein A
13_1_40cm_3_scaffold_329_13
RBG_16_Archaea_50_20_curated, Archaea

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13344..13943
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKJ1_PYRSN
putative transcriptional regulator; K06024 segregation and condensation protein B Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_329_14
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14060..14836
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG5X2-1 RepID=J8BK27_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJQ51985.1}; TaxID=1053191 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG5X2-
type 11 methyltransferase
13_1_40cm_3_scaffold_329_15
unknown

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comp(15064..15222)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_16
unknown

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comp(15703..15873)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_17
unknown

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15896..16354
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_18
unknown

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16407..16847
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_19
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(16955..18016)
DNA (1062bp) protein (354aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI000379DD81 rbh
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:BAJ46630.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candi
13_1_40cm_3_scaffold_329_20
unknown

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comp(18156..18350)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(18858..19601)
DNA (744bp) protein (248aa)
PREDICTED: serine racemase-like isoform X3 n=1 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_329_22
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(19632..20780)
DNA (1149bp) protein (383aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000255|HAM
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037DA33D
13_1_40cm_3_scaffold_329_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(20832..21245)
DNA (414bp) protein (138aa)
30S ribosomal protein S11 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS11_METKA
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Archaea_50_20_curated
rps11p; 30S ribosomal protein S11
13_1_40cm_3_scaffold_329_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21595..23964
DNA (2370bp) protein (790aa)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] Tax=RBG_16_Archaea_50_20_curated
Archaeal DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z6M3_9CREN
13_1_40cm_3_scaffold_329_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(23941..25218)
DNA (1278bp) protein (426aa)
DNA primase DnaG n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=DNAG_PYRFU
DNA primase Tax=RBG_16_Archaea_50_20_curated
DNA primase
13_1_40cm_3_scaffold_329_26
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

25488..25895
DNA (408bp) protein (136aa)
hypothetical protein Tax=RBG_16_Zixibacteria_53_22_curated
glyoxalase/bleomycin resistance protein/dioxygenase id=7718574 bin=BACIGN_2 species=Gordonia rhizosphera genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
Glyoxalase-like domain protein
13_1_40cm_3_scaffold_329_27
unknown

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comp(26013..27005)
DNA (993bp) protein (331aa)

This feature has no annotations

13_1_40cm_3_scaffold_329_28
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27239..28276
DNA (1038bp) protein (346aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] Tax=CG_Solirubrobact_01
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase, type II n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0H8_DEHLB
13_1_40cm_3_scaffold_329_29
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

28433..28819
DNA (387bp) protein (129aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXI3_9EURY
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RBG_16_Chloroflexi_51_16_curated
hypothetical protein
13_1_40cm_3_scaffold_329_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(28879..29832)
DNA (954bp) protein (318aa)
Putative circadian clock protein, KaiC n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ54_ARCVS
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
circadian clock protein KaiC
Displaying items 1-30 of 39 in total

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