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13_1_40cm_3_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_348_1
RBG_16_Archaea_50_20_curated, Archaea

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3..1754
DNA (1752bp) protein (584aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Archaea_50_20_curated
Methionine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE63_PYRF1
methionyl-tRNA synthetase
13_1_40cm_3_scaffold_348_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1744..2361
DNA (618bp) protein (206aa)
PHP domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW18_METFV
php domain protein; K07053 Tax=RBG_16_Archaea_50_20_curated
php domain-containing protein
13_1_40cm_3_scaffold_348_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2480..3265)
DNA (786bp) protein (262aa)
Cell division protein FtsZ n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFB2_9EURY
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division protein FtsZ
13_1_40cm_3_scaffold_348_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3706..5259)
DNA (1554bp) protein (518aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2) Tax=RBG_16_Bathyarchaeota_48_13_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMA3_THELI
13_1_40cm_3_scaffold_348_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5265..6674)
DNA (1410bp) protein (470aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Archaea_50_20_curated
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G8_9ARCH rbh
glycine dehydrogenase subunit alpha
13_1_40cm_3_scaffold_348_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6728..7771
DNA (1044bp) protein (348aa)
Putative glycosyl transferase, family 4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG1_NITGG
glycosyl transferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glycosyl transferase, family 4
13_1_40cm_3_scaffold_348_7
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

Not on your lists

comp(8396..9274)
DNA (879bp) protein (293aa)
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=5241165 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_13_Lokiarchaeota_45_8_curated
hypothetical protein
13_1_40cm_3_scaffold_348_8
unknown

Not on your lists

comp(9508..9837)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_3_scaffold_348_9
unknown

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comp(10069..10179)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_3_scaffold_348_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10712..11221
DNA (510bp) protein (170aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_348_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

11242..12483
DNA (1242bp) protein (414aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_348_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12934..13464)
DNA (531bp) protein (177aa)
Uncharacterized protein Mb1289 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L8C6_SIMNZ
uracil-DNA glycosylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_348_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(13553..14611)
DNA (1059bp) protein (353aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_348_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14819..15754
DNA (936bp) protein (312aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_348_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15761..16492)
DNA (732bp) protein (244aa)
Putative Thiosulfate sulfurtransferase (Rhodanese-like protein) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYU7_POLGS
rhodanese domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
thiosulfate sulfurtransferase
13_1_40cm_3_scaffold_348_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16575..17210)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N446_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_348_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17474..18277
DNA (804bp) protein (268aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Thioredoxin reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKB8_9CHLR
thioredoxin reductase
13_1_40cm_3_scaffold_348_18
unknown

Not on your lists

18295..18498
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_348_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18977..19678)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C6640
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC16058.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_348_20
unknown

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comp(19863..20198)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_348_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20504..22174)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003783E79
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_348_22
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22171..22956)
DNA (786bp) protein (262aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7G5_METCZ
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AFD00831.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;"
13_1_40cm_3_scaffold_348_23
unknown

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comp(23038..24579)
DNA (1542bp) protein (514aa)

This feature has no annotations

13_1_40cm_3_scaffold_348_24
unknown

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comp(24721..24849)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_3_scaffold_348_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(24905..25705)
DNA (801bp) protein (267aa)
asnA-2; L-asparagine amidohydrolase (EC:3.5.1.1); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RBG_16_Archaea_50_20_curated
Asparaginase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZK5_HERA2
asparaginase
13_1_40cm_3_scaffold_348_26
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25866..26528
DNA (663bp) protein (221aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZA4_DESAS
Sua5/YciO/YrdC/YwlC family protein
13_1_40cm_3_scaffold_348_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

26557..27084
DNA (528bp) protein (176aa)
Putative THUMP domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN99_NITGG
THUMP domain-containing protein Tax=RBG_13_Bathyarchaeota_38_9_curated
THUMP domain-containing protein
13_1_40cm_3_scaffold_348_28
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(27081..27641)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RU85_METFO
hypothetical protein; K09119 hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_348_29
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(27625..28176)
DNA (552bp) protein (184aa)
Phosphoribosyltransferase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0W2_DICTD
purine phosphoribosyltransferase; K07101 Tax=RBG_16_Archaea_50_20_curated
phosphoribosyltransferase
13_1_40cm_3_scaffold_348_30
unknown

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28526..28717
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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