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13_1_40cm_3_scaffold_357

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_357_1
unknown

Not on your lists

2..550
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_3_scaffold_357_2
unknown

Not on your lists

comp(606..968)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_3_scaffold_357_3
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(965..2641)
DNA (1677bp) protein (559aa)
seg id=5800515 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
13_1_40cm_3_scaffold_357_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2709..3653)
DNA (945bp) protein (315aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_357_5
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3733..4368)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F776F6
putative xylanase/chitin deacetylase
Tax=BJP_IG2069_Clostridiales_42_11
13_1_40cm_3_scaffold_357_6

Not on your lists

comp(4396..5298)
DNA (903bp) protein (301aa)
Marine sediment metagenome DNA, contig: S01H4_C05247 {ECO:0000313|EMBL:GAG63200.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_3_scaffold_357_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5295..6200)
DNA (906bp) protein (302aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase type 11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Methyltransferase type 11 id=2558592 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_357_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6287..7126)
DNA (840bp) protein (280aa)
methyltransferase (EC:2.1.1.-) Tax=GWA2_Rokubacteria_73_35_curated
Methyltransferase type 11 id=2558592 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_40cm_3_scaffold_357_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(7104..7922)
DNA (819bp) protein (273aa)
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Micrarchaeota_49_10_curated
Methyltransferase type 11 id=2558592 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_40cm_3_scaffold_357_10
unknown

Not on your lists

comp(7919..9265)
DNA (1347bp) protein (449aa)

This feature has no annotations

13_1_40cm_3_scaffold_357_11
unknown

Not on your lists

comp(9356..10708)
DNA (1353bp) protein (451aa)

This feature has no annotations

13_1_40cm_3_scaffold_357_12
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10737..11864)
DNA (1128bp) protein (376aa)
Putative Fe-S oxidoreductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKP2_CHLTF
putative Fe-S oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
putative Fe-S oxidoreductase
13_1_40cm_3_scaffold_357_13
unknown

Not on your lists

comp(11871..12077)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_3_scaffold_357_14
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(12132..13091)
DNA (960bp) protein (320aa)
hypothetical protein Tax=CG_Elusi_02
Putative uncharacterized protein id=3774697 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
HPr kinase
13_1_40cm_3_scaffold_357_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13088..14197)
DNA (1110bp) protein (370aa)
Radical SAM domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKV1_SYNFM
putative Fe-S oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
radical SAM domain-containing protein
13_1_40cm_3_scaffold_357_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14199..15212)
DNA (1014bp) protein (338aa)
Putative Fe-S oxidoreductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKP2_CHLTF
putative Fe-S oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative Fe-S oxidoreductase
13_1_40cm_3_scaffold_357_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15214..15513)
DNA (300bp) protein (100aa)
coenzyme pqq synthesis protein d (pqqd) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_3_scaffold_357_18
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(15501..17144)
DNA (1644bp) protein (548aa)
Uncharacterized protein id=4237397 bin=GWF2_OP3_43_52 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
tetratricopeptide repeat protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
13_1_40cm_3_scaffold_357_19
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17160..17411)
DNA (252bp) protein (84aa)
hypothetical protein Tax=RBG_13_Nitrospirae_41_22_curated
Putative uncharacterized protein id=4368785 bin=GWF2_Bacteroidetes_35_48 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
13_1_40cm_3_scaffold_357_20
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

17631..18473
DNA (843bp) protein (281aa)
ABC transporter, ATP binding subunit n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WN91_METH6
ABC-type multidrug transport system, ATPase component Tax=RBG_13_Nitrospirae_43_8_curated
ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_357_21
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

18470..19327
DNA (858bp) protein (286aa)
ABC transporter permease component id=2518074 bin=GWA2_Elusimicrobia_56_46 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
13_1_40cm_3_scaffold_357_22
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19519..21990
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKR5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62310.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
cell surface glycoprotein (s-layer protein) related protein
13_1_40cm_3_scaffold_357_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22264..22809
DNA (546bp) protein (182aa)
Uncharacterized protein id=4243675 bin=GWF2_Methylomirabilis_70_14 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
HEPN domain-containing protein
13_1_40cm_3_scaffold_357_24
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22800..23036
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034A15AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ18608.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
13_1_40cm_3_scaffold_357_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23400..23927)
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2558561 bin=GWA2_Methylomirabilis_73_35 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_3_scaffold_357_26
unknown

Not on your lists

24232..24912
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_40cm_3_scaffold_357_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(24900..25238)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037C0B6F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_3_scaffold_357_28
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(25375..25569)
DNA (195bp) protein (65aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14631647 bin=bin9_gal15 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
13_1_40cm_3_scaffold_357_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26108..26500
DNA (393bp) protein (131aa)
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2) Tax=GWA2_Rokubacteria_73_35_curated
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2)
Putative Peptidase M1, membrane alanine aminopeptidase id=2558355 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 29 items

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