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13_1_40cm_3_scaffold_352

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_352_1
unknown

Not on your lists

228..1379
DNA (1152bp) protein (384aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_2
unknown

Not on your lists

1360..2913
DNA (1554bp) protein (518aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_3
unknown

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2910..3224
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_4
GWA1_OP11_42_6_partial, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3352..4242
DNA (891bp) protein (297aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132)
Nucleotide sugar dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2V3_SPHTD
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:KKS65239.1}; TaxID=1618420 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_42_6.;"
13_1_40cm_3_scaffold_352_5
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4235..5440
DNA (1206bp) protein (402aa)
Glycosyl transferase family 2 n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AV89_FRADG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH08181.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
13_1_40cm_3_scaffold_352_6

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comp(5540..6904)
DNA (1365bp) protein (455aa)
seg 248..258 id=17589 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE20750.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_352_7

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comp(7152..8156)
DNA (1005bp) protein (335aa)
CorA family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQJ9_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:AKA49223.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
CorA family protein
13_1_40cm_3_scaffold_352_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

8322..11507
DNA (3186bp) protein (1062aa)
Isoleucine--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWG0_THEPD
isoleucyl-tRNA synthetase Tax=RBG_16_Bathyarchaeota_48_13_curated
ileS; isoleucyl-tRNA synthetase
13_1_40cm_3_scaffold_352_9
unknown

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comp(11728..12174)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_10
unknown

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12293..12484
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_11
unknown

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comp(13281..13835)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_12
GWC2_OD1_38_7, Parcubacteria, Bacteria

Not on your lists

13919..14206
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ78665.1}; Flags: Fragment;; TaxID=1618920 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_38_7.;"
13_1_40cm_3_scaffold_352_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

14263..14619
DNA (357bp) protein (119aa)
amino acid-binding ACT domain-containing protein Tax=AR4
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
13_1_40cm_3_scaffold_352_14
unknown

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14851..15411
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_15
unknown

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comp(15511..15966)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_3_scaffold_352_16
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16692..17120
DNA (429bp) protein (143aa)
histidine triad (HIT) protein Tax=GWB2_Geobacteraceae_52_12_curated
histidine triad (HIT) family hydrolase
Histidine triad (HIT) protein id=2154500 bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_3_scaffold_352_17
RBG_16_Archaea_50_20_curated, Archaea

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17364..18980
DNA (1617bp) protein (539aa)
DNA-binding response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_352_18
RLO_PLX_64_10, Bacteria

Not on your lists

19101..20102
DNA (1002bp) protein (334aa)
frdA; fumarate reductase flavoprotein subunit frdA; K00244 fumarate reductase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
frdA; fumarate reductase flavoprotein subunit frdA; K00244 fumarate reductase flavoprotein subunit [EC:1.3.99.1] id=14424437 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
fumarate reductase flavoprotein subunit
13_1_40cm_3_scaffold_352_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20099..20686
DNA (588bp) protein (196aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
fumarate reductase flavoprotein subunit id=14631497 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
13_1_40cm_3_scaffold_352_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20690..21436
DNA (747bp) protein (249aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) id=14631498 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdBC; putative fumarate reductase
13_1_40cm_3_scaffold_352_21
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21438..21833
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=1 Tax=Aeromonas media WS RepID=K2IDI9_AERME
fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000256|SAAS:SAAS00095967}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media
Displaying 21 items

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