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13_1_40cm_3_scaffold_383

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_383_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146..1084
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
NAD-dependent epimerase/dehydratase id=1975035 bin=GWD2_Deltaproteobacteria_55_8 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_383_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1117..3303)
DNA (2187bp) protein (729aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
DNA internalization-related competence protein ComEC/Rec2 id=2018834 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA internalization-related competence protein ComEC/Rec2
13_1_40cm_3_scaffold_383_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3556..5403)
DNA (1848bp) protein (616aa)
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
UvrABC system protein C id=2147710 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
uvrC; UvrABC system protein C
13_1_40cm_3_scaffold_383_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5693..6115
DNA (423bp) protein (141aa)
id=2052375 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
id=2052375 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_383_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6169..8205)
DNA (2037bp) protein (679aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
UvrABC system protein B id=4925457 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria rbh
excinuclease ABC subunit B
13_1_40cm_3_scaffold_383_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8249..9265)
DNA (1017bp) protein (339aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative uncharacterized protein id=1857247 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_383_7
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

9547..9936
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U9A3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY91026.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_1_40cm_3_scaffold_383_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10019..10285)
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_3_scaffold_383_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10377..11312)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B34178
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_3_scaffold_383_10
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11469..12929
DNA (1461bp) protein (487aa)
Peptidase, M20E (Gly-X carboxypeptidase) subfamily n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DA13_MYXXD rbh
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
13_1_40cm_3_scaffold_383_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12979..14301)
DNA (1323bp) protein (441aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C999_SPHTD
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACZ40392.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobac
13_1_40cm_3_scaffold_383_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14404..15993)
DNA (1590bp) protein (530aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UA82_CYAP2 rbh
Substrate-binding region of ABC-type glycine betaine transporter; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein Tax=RIFCSPLO
Substrate-binding region of ABC-type glycine betaine transporter
13_1_40cm_3_scaffold_383_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15990..16754)
DNA (765bp) protein (255aa)
Polyamine-transporting ATPase (EC:3.6.3.31)
proline/glycine betaine ABC transporter ATPase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC transporter related id=2116494 bin=GWD2_Deltaproteobacteria_55_8 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
13_1_40cm_3_scaffold_383_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16827..17855
DNA (1029bp) protein (343aa)
methyltransferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative uncharacterized protein id=2116497 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7335 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
methyltransferase
13_1_40cm_3_scaffold_383_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17959..18909)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI00037AB91E
putative Fatty acid desaturase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
putative fatty acid desaturase
13_1_40cm_3_scaffold_383_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18909..19556)
DNA (648bp) protein (216aa)
Lysine exporter protein (LYSE/YGGA) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative LysE/RhtB family amino acid efflux pump id=1832253 bin=GWD2_Deltaproteobacteria_55_8 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
threonine efflux protein
13_1_40cm_3_scaffold_383_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19741..20877
DNA (1137bp) protein (379aa)
Hyaluronidase; K01197 hyaluronoglucosaminidase [EC:3.2.1.35] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Hyaluronidase id=1832235 bin=GWD2_Deltaproteobacteria_55_8 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
Hyaluronidase
13_1_40cm_3_scaffold_383_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20950..21408
DNA (459bp) protein (153aa)
alpha/beta hydrolase fold protein; K10702 2-hydroxy-6-oxohepta-2,4-dienoate hydroxylase [EC:3.7.1.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative hydrolase or acyltransferase of alpha/beta superfamily id=1832205 bin=GWD2_Deltaproteobacteria_55_8 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alpha/beta hydrolase fold protein
13_1_40cm_3_scaffold_383_19
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21441..21731
DNA (291bp) protein (97aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Putative hydrolase or acyltransferase of alpha/beta superfamily id=1832205 bin=GWD2_Deltaproteobacteria_55_8 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_383_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21814..23205
DNA (1392bp) protein (464aa)
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Putative uncharacterized protein id=1832204 bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter santoriniensis genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_383_21
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23215..24168
DNA (954bp) protein (318aa)
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Uncharacterized protein id=1832203 bin=GWD2_Deltaproteobacteria_55_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyltransferase
13_1_40cm_3_scaffold_383_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24211..24831)
DNA (621bp) protein (207aa)
major facilitator superfamily protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
arabinose efflux permease family protein id=14429985 bin=bin3_NC10 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
arabinose efflux permease family protein
13_1_40cm_3_scaffold_383_23
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24897..25445)
DNA (549bp) protein (183aa)
arabinose efflux permease family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
arabinose efflux permease family protein id=14429985 bin=bin3_NC10 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
arabinose efflux permease family protein
13_1_40cm_3_scaffold_383_24
unknown

Not on your lists

25622..25996
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying 24 items

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