ggKbase home page

13_1_40cm_3_scaffold_414

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_414_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

3..608
DNA (606bp) protein (202aa)
lactoylglutathione lyase-like lyase; K15975 glyoxalase family protein id=14632230 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
lactoylglutathione lyase-like lyase; K15975 glyoxalase family protein Tax=CSP1_3_Armatimonadetes
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_414_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

608..1261
DNA (654bp) protein (218aa)
phospholipase/carboxylesterase family protein (EC:3.1.1.1)
Phospholipase/carboxylesterase family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKX9_NITGG
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_3_scaffold_414_3
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(1360..2385)
DNA (1026bp) protein (342aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I418_CALAS rbh
ABC transporter permease; K02057 simple sugar transport system permease protein Tax=RBG_13_Chloroflexi_60_13_curated
ABC transporter permease
13_1_40cm_3_scaffold_414_4
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(2418..3191)
DNA (774bp) protein (258aa)
putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] Tax=RBG_13_Chloroflexi_60_13_curated
cap:CLDAP_19670 putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] id=1246860 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
putative ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_414_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(3398..4426)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I420_CALAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00008.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_3_scaffold_414_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(4550..5710)
DNA (1161bp) protein (387aa)
Peptidase M24 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH05_THET1
peptidase M24 Tax=RBG_16_Chloroflexi_54_18_curated
peptidase M24
13_1_40cm_3_scaffold_414_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(5751..6911)
DNA (1161bp) protein (387aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase {ECO:0000313|EMBL:ACM06891.1}; EC=4.2.1.6 {ECO:0000313|EMBL:ACM06891.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;"
dehydratase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5E75D
13_1_40cm_3_scaffold_414_8
Bacillus ginsengihumi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6916..7872)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034B232D rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD85849.1}; TaxID=363870 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus ginsengihumi.;"
hypothetical protein
13_1_40cm_3_scaffold_414_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(7878..9902)
DNA (2025bp) protein (675aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilin
Beta-galactosidase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1X8_CALAS rbh
putative beta-galactosidase
13_1_40cm_3_scaffold_414_10

Not on your lists

comp(9905..10711)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000366D968
Uncharacterized protein {ECO:0000313|EMBL:KKM23867.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_414_11

Not on your lists

comp(10716..11657)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036C78F5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM23868.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_414_12

Not on your lists

comp(11671..12966)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00035F13D4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM23869.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_414_13
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12990..14021)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000375FE13
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EES72361.1}; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibaci
alcohol dehydrogenase GroES domain-containing protein
13_1_40cm_3_scaffold_414_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14018..14818)
DNA (801bp) protein (267aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYK0_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03528.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_1_40cm_3_scaffold_414_15
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(14869..15378)
DNA (510bp) protein (170aa)
hypothetical protein id=24429369 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sulfolobus tokodaii genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
magnesium-dependent phosphatase-1
Magnesium-dependent phosphatase-1 {ECO:0000313|EMBL:ABL79064.1}; Flags: Precursor;; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="
13_1_40cm_3_scaffold_414_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(15368..15997)
DNA (630bp) protein (210aa)
phosphoribosyl-AMP cyclohydrolase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] id=24429370 bin=RBG_19FT_COMBO_GAL15_69_19 species=Faecalibacterium sp. CAG:74 genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phosphoribosyl-AMP cyclohydrolase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
phosphoribosyl-ATP diphosphatase
13_1_40cm_3_scaffold_414_17
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16096..16860)
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB53_AMMDK
imidazole glycerol phosphate synthase subunit HisF
13_1_40cm_3_scaffold_414_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16854..17339)
DNA (486bp) protein (162aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] T
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NEP2_9FIRM
13_1_40cm_3_scaffold_414_19
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17496..18146)
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ75_PELTS
hisH; imidazole glycerol phosphate synthase subunit HisH
13_1_40cm_3_scaffold_414_20
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18146..18646)
DNA (501bp) protein (167aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BR06_9ACTN
Displaying 20 items

View Taxonomy