ggKbase home page

13_1_40cm_3_scaffold_467

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_467_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(8..1468)
DNA (1461bp) protein (487aa)
UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=GLMU_SOLUE
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC
13_1_40cm_3_scaffold_467_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1538..2452)
DNA (915bp) protein (305aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_cura
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL0_KORVE
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
13_1_40cm_3_scaffold_467_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2714..3952
DNA (1239bp) protein (413aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Carboxyl-terminal protease n=1 Tax=mine drainage metagenome RepID=E6QKE1_9ZZZZ
carboxyl-terminal protease
13_1_40cm_3_scaffold_467_4
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3959..5128
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PE47_9ZZZZ
hypothetical protein; K09798 hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
sugar deacetylase
13_1_40cm_3_scaffold_467_5
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5084..6082)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CAA6D
CAAX amino terminal protease
CAAX amino terminal protease family {ECO:0000313|EMBL:AFL86805.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain
13_1_40cm_3_scaffold_467_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6437..7078)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C87_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81329.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_3_scaffold_467_7
Bacillus clausii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7142..7846
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WAM5_BACSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD66585.1}; TaxID=66692 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus clausii (strain KSM-K16).;"
13_1_40cm_3_scaffold_467_8
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7863..9251)
DNA (1389bp) protein (463aa)
peptidase M48 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B32AE8
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ADV81164.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis
13_1_40cm_3_scaffold_467_9
unknown

Not on your lists

comp(9414..9893)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037FC4D6
13_1_40cm_3_scaffold_467_10
unknown

Not on your lists

10096..10686
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_3_scaffold_467_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10795..11826)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV87_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39213.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_467_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11861..13771)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378C3FB rbh
Regulatory sensor-transducer, BlaR1/MecR1 family protein {ECO:0000313|EMBL:KFE68377.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacter
TonB domain/peptidase M56 domain-containing protein
13_1_40cm_3_scaffold_467_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13768..14157)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000377631B
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ABF39215.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_3_scaffold_467_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14252..15238)
DNA (987bp) protein (329aa)
hypothetical protein id=4996874 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_3_scaffold_467_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15318..16175)
DNA (858bp) protein (286aa)
Membrane protease subunit Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Membrane protease subunit id=3364562 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
membrane protease subunit
13_1_40cm_3_scaffold_467_16
unknown

Not on your lists

16556..16777
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_3_scaffold_467_17
unknown

Not on your lists

comp(16937..17311)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_3_scaffold_467_18
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17343..20192)
DNA (2850bp) protein (950aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RBG_16_Gamma2_64_10_curated
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent id=4605337 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
vitamin B12-dependent ribonucleotide reductase
13_1_40cm_3_scaffold_467_19
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20758..21396
DNA (639bp) protein (213aa)
Protein tyrosine/serine phosphatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRR4_9BACT
protein tyrosine/serine phosphatase Tax=RBG_16_Gamma2_64_10_curated
protein tyrosine/serine phosphatase
13_1_40cm_3_scaffold_467_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21615..22499
DNA (885bp) protein (295aa)
Serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWE1_Thiobacillus_62_9_curated
Serine/Threonine protein kinase id=1353649 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
serine/threonine protein kinase
13_1_40cm_3_scaffold_467_21
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22499..23260
DNA (762bp) protein (254aa)
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7Y9_AMMDK
serine/threonine protein kinase with PASTA sensor(s)
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:ACX52418.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella gr
Displaying 21 items

View Taxonomy