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13_1_40cm_3_scaffold_458

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_458_1

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3..128
DNA (126bp) protein (42aa)
Marine sediment metagenome DNA, contig: S03H2_L01487 {ECO:0000313|EMBL:GAH33583.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_3_scaffold_458_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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298..687
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_458_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(708..1286)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDG1_NAKMY
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_40cm_3_scaffold_458_4
unknown

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comp(1364..2185)
DNA (822bp) protein (274aa)

This feature has no annotations

13_1_40cm_3_scaffold_458_5
unknown

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2498..2785
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_3_scaffold_458_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2782..4512)
DNA (1731bp) protein (577aa)
Putative ABC transporter, permease protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBL2_9BACT
ABC transporter permease {ECO:0000313|EMBL:KFA93892.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
ABC transporter permease
13_1_40cm_3_scaffold_458_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4509..5228)
DNA (720bp) protein (240aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A524_GEMAT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG87772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_458_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5324..5785
DNA (462bp) protein (154aa)
MarR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUV7_9SPHN
MarR family transcriptional regulator
DNA, contig: SP650 {ECO:0000313|EMBL:GAN15115.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
13_1_40cm_3_scaffold_458_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6154..6732
DNA (579bp) protein (193aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000376C138
silent information regulator protein Sir2
13_1_40cm_3_scaffold_458_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6729..8132
DNA (1404bp) protein (468aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyruvate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D6_GEMAT
pyruvate kinase
13_1_40cm_3_scaffold_458_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8134..8913
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_40cm_3_scaffold_458_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9174..10391
DNA (1218bp) protein (406aa)
Aldolase n=1 Tax=uncultured prokaryote RepID=H5S9P5_9ZZZZ
putative fructose-bisphosphate aldolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative fructose-bisphosphate aldolase
13_1_40cm_3_scaffold_458_13
unknown

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10388..10693
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_458_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10690..11583
DNA (894bp) protein (298aa)
tRNA-processing ribonuclease BN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E1_GEMAT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
13_1_40cm_3_scaffold_458_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11652..12617
DNA (966bp) protein (322aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E2_GEMAT
13_1_40cm_3_scaffold_458_16
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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12651..14360
DNA (1710bp) protein (570aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6V3_9DELT
Radical SAM domain protein {ECO:0000313|EMBL:EHJ48038.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfo
hypothetical protein
13_1_40cm_3_scaffold_458_17
unknown

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14790..15341
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_3_scaffold_458_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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15511..16734
DNA (1224bp) protein (408aa)
Mov34/MPN/PAD-1 family protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_3_scaffold_458_19
unknown

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16731..18296
DNA (1566bp) protein (522aa)

This feature has no annotations

13_1_40cm_3_scaffold_458_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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18611..20257
DNA (1647bp) protein (549aa)
dnaX; DNA polymerase III gamma and tau subunit (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III gamma and tau subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E4_GEMAT
DNA polymerase III, subunits gamma and tau
13_1_40cm_3_scaffold_458_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20295..20612
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037BEE41
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0133 protein ybaB
13_1_40cm_3_scaffold_458_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20619..21221
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E6_GEMAT
recR; recombination protein RecR; K06187 recombination protein RecR Tax=GWC2_Gemmatimonadetes_71_10_curated
recR; recombination protein RecR
13_1_40cm_3_scaffold_458_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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21235..21723
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_458_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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21736..22410
DNA (675bp) protein (225aa)
Gliding motility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E8_GEMAT
gliding motility protein; K06883 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gliding motility protein
13_1_40cm_3_scaffold_458_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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22423..23064
DNA (642bp) protein (214aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E9_GEMAT
13_1_40cm_3_scaffold_458_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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23061..24320
DNA (1260bp) protein (420aa)
CinA-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CINAL_GEMAT
CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Competence-damaged protein
13_1_40cm_3_scaffold_458_27
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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24320..25144
DNA (825bp) protein (275aa)
Lysophospholipase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WB88_DESOD
hypothetical protein Tax=CG_Delta_07
lysophospholipase
13_1_40cm_3_scaffold_458_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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25337..25954
DNA (618bp) protein (206aa)
Protein GrpE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F5_GEMAT
grpE; GrpE protein; K03687 molecular chaperone GrpE Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein grpE
13_1_40cm_3_scaffold_458_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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25954..27036
DNA (1083bp) protein (361aa)
Chaperone protein DnaJ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F6_GEMAT
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
dnaJ; chaperone protein DnaJ
13_1_40cm_3_scaffold_458_30
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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27051..28106
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXS8_AZOBR rbh
conserved protein of unknown function; xylose isomerase-like domain
Uncharacterized protein {ECO:0000313|EMBL:CCD02687.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
Displaying items 1-30 of 36 in total

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