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13_1_40cm_3_scaffold_571

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_571_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(493..1215)
DNA (723bp) protein (241aa)
Cobalt/nickel ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z5_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter permease
13_1_40cm_3_scaffold_571_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1196..2038)
DNA (843bp) protein (281aa)
Cobalt/nickel ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z4_9ARCH
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_571_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(2035..2901)
DNA (867bp) protein (289aa)
Cobalt/nickel ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z3_9ARCH
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_571_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(2960..3745)
DNA (786bp) protein (262aa)
Predicted phosphoesterase, DHH family n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKC6_HYPBU
DHH family phosphoesterase; K06881 phosphoesterase RecJ domain-containing protein Tax=RBG_16_Archaea_50_20_curated
DHH family phosphoesterase
13_1_40cm_3_scaffold_571_5
unknown

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3906..4058
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_3_scaffold_571_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4000..4431)
DNA (432bp) protein (144aa)
pfdB; prefoldin, subunit beta Tax=RBG_16_Archaea_50_20_curated
pfdB; prefoldin, subunit beta
prefoldin, chaperonin cofactor; K04798 prefoldin beta subunit id=14427074 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_3_scaffold_571_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(4674..5114)
DNA (441bp) protein (147aa)
50S ribosomal protein L37Ae n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI24_PYRYC
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L37Ae
13_1_40cm_3_scaffold_571_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5114..5932)
DNA (819bp) protein (273aa)
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated
exosome complex RNA-binding protein Rrp42
13_1_40cm_3_scaffold_571_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(5932..6699)
DNA (768bp) protein (256aa)
Exosome complex component Rrp41 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH18_PYRYC
rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_16_Archaea_50_20_curated
exosome complex exonuclease Rrp41
13_1_40cm_3_scaffold_571_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6727..7341)
DNA (615bp) protein (205aa)
Exosome complex component Rrp4 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RB40_METFO
KH domain containing protein; K03679 exosome complex component RRP4 Tax=RBG_16_Archaea_50_20_curated
exosome complex RNA-binding protein Rrp4
13_1_40cm_3_scaffold_571_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(7354..8043)
DNA (690bp) protein (230aa)
Putative ribosome maturation protein SDO1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH0_NITGG
ribosome maturation protein SDO1 Tax=RBG_16_Archaea_50_20_curated
rRNA metabolism protein, SBDS family
13_1_40cm_3_scaffold_571_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8040..8783)
DNA (744bp) protein (248aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
proteasome alpha subunit (EC:3.4.25.1)
Proteasome alpha subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Y4_9ARCH
13_1_40cm_3_scaffold_571_13
unknown

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comp(8967..9302)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_571_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

9532..9897
DNA (366bp) protein (122aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_16_Bathyarchaeota_48_13_curated
Peptidyl-tRNA hydrolase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH27_PYRYC
peptidyl-tRNA hydrolase
13_1_40cm_3_scaffold_571_15
unknown

Not on your lists

10080..10298
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_3_scaffold_571_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10257..12002)
DNA (1746bp) protein (582aa)
yycF; two-component response regulator; K07668 two-component system, OmpR family, response regulator VicR Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_571_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12417..13427)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ABP4_IGNH4
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_571_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13579..14343
DNA (765bp) protein (255aa)
putative circadian clock protein KaiC (EC:2.7.11.1)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_571_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14340..15410)
DNA (1071bp) protein (357aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_571_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15430..16170)
DNA (741bp) protein (247aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
circadian clock protein KaiC Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_571_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

16516..17319
DNA (804bp) protein (268aa)
Isopentenyl phosphate kinase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6E2_METTP
aspartate/glutamate/uridylate kinase; K06981 Tax=RBG_16_Bathyarchaeota_48_13_curated
aspartate/glutamate/uridylate kinase
13_1_40cm_3_scaffold_571_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17313..18323)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVR1_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_571_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18399..18893)
DNA (495bp) protein (165aa)
50S ribosomal protein L15e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IDZ5_NITGG
rpl15e; 50S ribosomal protein L15e
50S ribosomal protein L15e {ECO:0000313|EMBL:AIC15890.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaer
13_1_40cm_3_scaffold_571_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

18950..20305
DNA (1356bp) protein (452aa)
NADP-dependent malic enzyme n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8J1_9EURY rbh
NADP-dependent malic enzyme Tax=RBG_16_Archaea_50_20_curated
NADP-dependent malic enzyme
13_1_40cm_3_scaffold_571_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

20597..20992
DNA (396bp) protein (132aa)
NADP oxidoreductase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U262_9EURY
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
dinucleotide-binding protein
13_1_40cm_3_scaffold_571_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21011..22168
DNA (1158bp) protein (386aa)
Putative GTPase n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q975G0_SULTO
GTP binding protein Tax=RBG_16_Archaea_50_20_curated
ychF; translation-associated GTPase
13_1_40cm_3_scaffold_571_27
unknown

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comp(22616..22942)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_571_28
RBG_16_Archaea_50_20_curated, Archaea

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comp(23097..23783)
DNA (687bp) protein (229aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RBG_16_Archaea_50_20_
Nucleotidyl transferase n=1 Tax=Sulfolobus solfataricus (strain 98/2) RepID=D0KTE8_SULS9
nucleotidyltransferase
Displaying 28 items

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