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13_1_40cm_3_scaffold_5862

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5862_1
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..181
DNA (180bp) protein (60aa)
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:ERK85432.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus
13_1_40cm_3_scaffold_5862_2
unknown

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comp(190..579)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_3_scaffold_5862_3
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(622..882)
DNA (261bp) protein (87aa)
Cytochrome c oxidase (B(O/a)3-type) chain II (EC:1.9.3.1)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036A9B22
Tax=BJP_IG2069_Syntrophobacterales_46_30
13_1_40cm_3_scaffold_5862_4
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(968..1906)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGQ9_COLFT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK61672.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivor
13_1_40cm_3_scaffold_5862_5
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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2002..2382
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=4672637 bin=GWC2_Nitrospirae-rel_56_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Putative uncharacterized protein Tax=GWC2_Nitrospirae_56_14_curated
13_1_40cm_3_scaffold_5862_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2423..2827)
DNA (405bp) protein (135aa)
arsC2; arsenate reductase (glutaredoxin) (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJG9_9DELT
Arsenate reductase {ECO:0000313|EMBL:KFA92413.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystoba
13_1_40cm_3_scaffold_5862_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2824..3588)
DNA (765bp) protein (255aa)
MIP family protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTD4_SORCE rbh
MIP family protein
MIP family protein {ECO:0000313|EMBL:AGP33848.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
13_1_40cm_3_scaffold_5862_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3569..3985)
DNA (417bp) protein (139aa)
Transcriptional regulator, ArsR family n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SH46_PLABD
ArsR family transcriptional regulator Tax=RBG_16_Planctomycetes_64_12_curated
ArsR family transcriptional regulator
13_1_40cm_3_scaffold_5862_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(4055..4402)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W095_9BURK
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
13_1_40cm_3_scaffold_5862_10
unknown

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4441..4548
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_3_scaffold_5862_11
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4783..5580
DNA (798bp) protein (266aa)
Transcriptional regulator, LuxR family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1Q0_MYXXD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABF89349.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
13_1_40cm_3_scaffold_5862_12
Pseudoalteromonas sp. OCN003, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5609..5860)
DNA (252bp) protein (84aa)
cell envelope biogenesis protein OmpA n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI0003472F32
cell envelope biogenesis protein OmpA
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:AIY66518.1}; TaxID=1348114 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;"
13_1_40cm_3_scaffold_5862_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5857..6627)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FP67_SORC5
hypothetical protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
hypothetical protein
13_1_40cm_3_scaffold_5862_14
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6700..7182
DNA (483bp) protein (161aa)
Possible streptogramin lyase, gluconolactonase family protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z1T3_9ALTE
lyase -like protein Tax=GWC2_Geobacteraceae_58_44_curated
lyase -like protein
13_1_40cm_3_scaffold_5862_15
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..7606
DNA (396bp) protein (132aa)
Streptogramin lyase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZC1_NITHN
streptogramin lyase Tax=RBG_16_Deltaproteobacteria_49_23_curated
streptogramin lyase
13_1_40cm_3_scaffold_5862_16
Aeromonas diversa, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8149..9522)
DNA (1374bp) protein (458aa)
Putative endoribonuclease L-PSP n=1 Tax=Aeromonas diversa 2478-85 RepID=N9VHT6_9GAMM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ENY71168.1}; TaxID=1268237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas diver
putative endoribonuclease L-PSP
13_1_40cm_3_scaffold_5862_17
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9780..10436
DNA (657bp) protein (219aa)
Beta-lactamase domain-containing protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XBM9_RHOOP
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EKT78246.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213
beta-lactamase domain-containing protein
13_1_40cm_3_scaffold_5862_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10433..11404
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035EA03D
Uncharacterized protein {ECO:0000313|EMBL:EKS39508.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
alcohol dehydrogenase
13_1_40cm_3_scaffold_5862_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11531..11833
DNA (303bp) protein (101aa)
Oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F4D3_SORC5
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:CAN97697.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum
13_1_40cm_3_scaffold_5862_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11908..12228
DNA (321bp) protein (107aa)
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKC7_KORVE
DMT family permease
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily {ECO:0000313|EMBL:ABF42673.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kori
Displaying 20 items

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